RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ENO4A6NNW6 628 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 TRIM77I1YAP6 450 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 SOCS6O14544 535 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 CLIC2O15247 247 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 SLC16A5O15375 505 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 CHMP2AO43633 222 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 FAM189A1O60320 539 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 FMO6PO60774 539 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 LRP3O75074 770 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 MED24O75448 989 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 SLITRK3O94933 977 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 DEXIO95424 95 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 CTDNEP1O95476 244 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 CH25HO95992 272 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 DCNP07585 359 aaKnown RBP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 PDGFRAP16234 1089 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 GCFC2P16383 781 aaKnown RBP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 CEBPBP17676 345 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 GLRA2P23416 452 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 EEF1B2P24534 225 aaKnown RBP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 PSMA3P25788 255 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 CDC25CP30307 473 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 HOXD3P31249 432 aaPredicted RBP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 HOXA6P31267 233 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 YWHABP31946 246 aaKnown RBP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 CCR2P41597 374 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 NAGLUP54802 743 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 GAS1P54826 345 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 CLDN20P56880 219 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 KRTAP10-8P60410 259 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 TUBB4BP68371 445 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 NTHL1P78549 312 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 CRYZQ08257 329 aaKnown RBP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 ACSM1Q08AH1 577 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 GPS2Q13227 327 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 UBE2V1Q13404 147 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 SLMAPQ14BN4 828 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 MLF2Q15773 248 aaPredicted RBP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 MEP1BQ16820 701 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 UPP1Q16831 310 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 TYSND1Q2T9J0 566 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 KLHL26Q53HC5 615 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 RAB6CQ53S08 254 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 ZRANB3Q5FWF4 1079 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 KCNT1Q5JUK3 1230 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 EFHC1Q5JVL4 640 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 PAPPA-AS1Q5QFB9 102 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 SPOUT1Q5T280 376 aaKnown RBP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 RNASEH2BQ5TBB1 312 aaKnown RBP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 NADSYN1Q6IA69 706 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 TYW3Q6IPR3 259 aaKnown RBP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 GALNT17Q6IS24 598 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 NOTUMQ6P988 496 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 SLC27A1Q6PCB7 646 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 IYDQ6PHW0 289 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 PRSS55Q6UWB4 352 aaPredicted RBP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 ALKAL1Q6UXT8 129 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 PPP1R21Q6ZMI0 780 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 GET4Q7L5D6 327 aaPredicted RBP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 DET1Q7L5Y6 550 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 CATSPER4Q7RTX7 472 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 DGLUCYQ7Z3D6 616 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 MIER3Q7Z3K6 550 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 PIWIL3Q7Z3Z3 882 aaKnown RBP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 SPATA19Q7Z5L4 167 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 CCDC91Q7Z6B0 441 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 UNC45BQ8IWX7 931 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 TIGD4Q8IY51 512 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 CCDC170Q8IYT3 715 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 BLIDQ8IZY5 108 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 DAW1Q8N136 415 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 NUP93Q8N1F7 819 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 SIX6OS1Q8N1H7 587 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 DCLK2Q8N568 766 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 TMCO5AQ8N6Q1 288 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 RNF149Q8NC42 400 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 CNNM3Q8NE01 707 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 OR5R1Q8NH85 324 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 MOSPD2Q8NHP6 518 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 ITFG1Q8TB96 612 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 LNX1Q8TBB1 728 aaPredicted RBP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 URGCPQ8TCY9 931 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 UTP15Q8TED0 518 aaKnown RBP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 CCDC12Q8WUD4 166 aaPredicted RBP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 DNASE1L2Q92874 299 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 SLAMF9Q96A28 289 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 TMEM143Q96AN5 459 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 ZNF274Q96GC6 653 aaPredicted RBP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 TXNDC15Q96J42 360 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 CCDC114Q96M63 670 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 MTMR9Q96QG7 549 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 OLFM1Q99784 485 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 JPH2Q9BR39 696 aaPredicted RBP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 NTPCRQ9BSD7 190 aaKnown RBP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 SLC25A33Q9BSK2 321 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 MLPHQ9BV36 600 aaPredicted RBP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 PLA2G2FQ9BZM2 168 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 TM6SF1Q9BZW5 370 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 RAB6CQ9H0N0 254 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 FZD8Q9H461 694 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms