RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 C11orf44Q8N8P7 122 aa4.65□□□□□ -1.67
SDCBP-213ENST00000630925 ANKLE1Q8NAG6 615 aa4.65□□□□□ -1.67
SDCBP-213ENST00000630925 GATSQ8NAP1 163 aa4.65□□□□□ -1.67
SDCBP-213ENST00000630925 CYB561A3Q8NBI2 242 aa4.65□□□□□ -1.67
SDCBP-213ENST00000630925 OR10Z1Q8NGY1 313 aa4.65□□□□□ -1.67
SDCBP-213ENST00000630925 TBC1D16Q8TBP0 767 aa4.65□□□□□ -1.67
SDCBP-213ENST00000630925 ADAMTS16Q8TE57 1224 aa4.65□□□□□ -1.67
SDCBP-213ENST00000630925 OPALINQ96PE5 141 aa4.65□□□□□ -1.67
SDCBP-213ENST00000630925 SMOQ99835 787 aa4.65□□□□□ -1.67
SDCBP-213ENST00000630925 WWP1Q9H0M0 922 aa4.65□□□□□ -1.67
SDCBP-213ENST00000630925 KCNN2Q9H2S1 579 aa4.65□□□□□ -1.67
SDCBP-213ENST00000630925 RNF14Q9UBS8 474 aa4.65□□□□□ -1.67
SDCBP-213ENST00000630925 FBLN5Q9UBX5 448 aa4.65□□□□□ -1.67
SDCBP-213ENST00000630925 SLC12A4Q9UP95 1085 aa4.65□□□□□ -1.67
SDCBP-213ENST00000630925 ELP1O95163 1332 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 CCDC144AA2RUR9 1427 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 C10orf71Q711Q0 1435 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 TBC1D3DA0A087WVF3 549 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 TBC1D3IA0A087WXS9 549 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 TBC1D3EA0A087X179 549 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 TBC1D3KA0A087X1G2 549 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 FAM237AA0A1B0GTK4 181 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 FUOMA2VDF0 154 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 TBC1D3BA6NDS4 549 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 TBC1D3FA6NER0 549 aaPredicted RBP4.64□□□□□ -1.67
SDCBP-213ENST00000630925 TUBAL3A6NHL2 446 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 SNTNA6NMZ2 147 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 TBC1D3LB9A6J9 549 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 NKX2-8O15522 239 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 ATP8B1O43520 1251 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 FCER2P06734 321 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 MMP10P09238 476 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 TBC1D3HP0C7X1 549 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 ANXA7P20073 488 aaKnown RBP4.64□□□□□ -1.67
SDCBP-213ENST00000630925 TPSB2P20231 275 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 MAGP20916 626 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 FUT4P22083 530 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 PTGS1P23219 599 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 ITGA3P26006 1051 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 NDST2P52849 883 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 LBX1P52954 281 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 PPP2CBP62714 309 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 PPP2CAP67775 309 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 HSD11B2P80365 405 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 MAT1AQ00266 395 aaKnown RBP4.64□□□□□ -1.67
SDCBP-213ENST00000630925 TCF15Q12870 199 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 TPSAB1Q15661 275 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 EXT1Q16394 746 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 C18orf21Q32NC0 220 aaPredicted RBP4.64□□□□□ -1.67
SDCBP-213ENST00000630925 ZC2HC1CQ53FD0 456 aaPredicted RBP4.64□□□□□ -1.67
SDCBP-213ENST00000630925 CTSL3PQ5NE16 218 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 LRIF1Q5T3J3 769 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 DCAF12L2Q5VW00 463 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 TBC1D3GQ6DHY5 549 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 ASPHD2Q6ICH7 369 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 TBC1D3CQ6IPX1 549 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 CBLN3Q6UW01 205 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 ZFAND4Q86XD8 727 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 ZSWIM9Q86XI8 627 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 CLEC10AQ8IUN9 316 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 VSTM4Q8IW00 320 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 MICU2Q8IYU8 434 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 TBC1D3Q8IZP1 549 aaPredicted RBP4.64□□□□□ -1.67
SDCBP-213ENST00000630925 LINC00528Q8N1L1 170 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 IL22RA1Q8N6P7 574 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 ANKRD13CQ8N6S4 541 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 TTC29Q8NA56 475 aaPredicted RBP4.64□□□□□ -1.67
SDCBP-213ENST00000630925 OR4C5Q8NGB2 326 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 OR13C3Q8NGS6 347 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 DTD1Q8TEA8 209 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 LZICQ8WZA0 190 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 LPAR1Q92633 364 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 CD101Q93033 1021 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 LENG9Q96B70 501 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 CCDC127Q96BQ5 260 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 COQ2Q96H96 371 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 HSD17B14Q9BPX1 270 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 H2AFJQ9BTM1 129 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 NPLQ9BXD5 320 aaPredicted RBP4.64□□□□□ -1.67
SDCBP-213ENST00000630925 GSX1Q9H4S2 264 aaPredicted RBP4.64□□□□□ -1.67
SDCBP-213ENST00000630925 TRIM45Q9H8W5 580 aaPredicted RBP4.64□□□□□ -1.67
SDCBP-213ENST00000630925 AGO3Q9H9G7 860 aaKnown RBP4.64□□□□□ -1.67
SDCBP-213ENST00000630925 LYRM4Q9HD34 91 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 SLC17A7Q9P2U7 560 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 MYOTQ9UBF9 498 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 KLQ9UEF7 1012 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 SLC23A1Q9UHI7 598 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 HACL1Q9UJ83 578 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 CA5BQ9Y2D0 317 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 WASF2Q9Y6W5 498 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 LRPPRCP42704 1394 aaKnown RBP4.64□□□□□ -1.67
SDCBP-213ENST00000630925 PXDNLA1KZ92 1463 aa4.64□□□□□ -1.67
SDCBP-213ENST00000630925 GSTTP1A0A1W2PQM5 241 aa4.63□□□□□ -1.67
SDCBP-213ENST00000630925 FAM90A10PA6NDY2 464 aa4.63□□□□□ -1.67
SDCBP-213ENST00000630925 FBLL1A6NHQ2 334 aaKnown RBP4.63□□□□□ -1.67
SDCBP-213ENST00000630925 ANKRD30BLA7E2S9 258 aa4.63□□□□□ -1.67
SDCBP-213ENST00000630925 USP17L23D6RBM5 183 aa4.63□□□□□ -1.67
SDCBP-213ENST00000630925 E7ESA3 106 aa4.63□□□□□ -1.67
SDCBP-213ENST00000630925 SLC28A1O00337 649 aa4.63□□□□□ -1.67
SDCBP-213ENST00000630925 TOR1AO14656 332 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms