RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	TRIM40	Q6P9F5	258 aa		24.69	■■□□□ 1.54
UBE3A-222	ENST00000630907	KDF1	Q8NAX2	398 aa	Predicted RBP	24.69	■■□□□ 1.54
UBE3A-222	ENST00000630907	OR2L5	Q8NG80	312 aa		24.69	■■□□□ 1.54
UBE3A-222	ENST00000630907	OR51B5	Q9H339	312 aa		24.69	■■□□□ 1.54
UBE3A-222	ENST00000630907	TNFRSF12A	Q9NP84	129 aa		24.69	■■□□□ 1.54
UBE3A-222	ENST00000630907	MED4	Q9NPJ6	270 aa		24.69	■■□□□ 1.54
UBE3A-222	ENST00000630907	SLC22A11	Q9NSA0	550 aa		24.69	■■□□□ 1.54
UBE3A-222	ENST00000630907	FARSB	Q9NSD9	589 aa	Known RBP	24.69	■■□□□ 1.54
UBE3A-222	ENST00000630907	NAALAD2	Q9Y3Q0	740 aa		24.69	■■□□□ 1.54
UBE3A-222	ENST00000630907	SEC16A	O15027	2179 aa		24.69	■■□□□ 1.54
UBE3A-222	ENST00000630907	APC2	O95996	2303 aa		24.68	■■□□□ 1.54
UBE3A-222	ENST00000630907	SGK494	L7N484	410 aa		24.68	■■□□□ 1.54
UBE3A-222	ENST00000630907	TAF4	O00268	1085 aa		24.68	■■□□□ 1.54
UBE3A-222	ENST00000630907	GALR3	O60755	368 aa	Predicted RBP	24.68	■■□□□ 1.54
UBE3A-222	ENST00000630907	PDYN	P01213	254 aa		24.68	■■□□□ 1.54
UBE3A-222	ENST00000630907	UROS	P10746	265 aa		24.68	■■□□□ 1.54
UBE3A-222	ENST00000630907	FBL	P22087	321 aa	Known RBP	24.68	■■□□□ 1.54
UBE3A-222	ENST00000630907	ARRB2	P32121	409 aa		24.68	■■□□□ 1.54
UBE3A-222	ENST00000630907	DLST	P36957	453 aa		24.68	■■□□□ 1.54
UBE3A-222	ENST00000630907	PLA2G16	P53816	162 aa		24.68	■■□□□ 1.54
UBE3A-222	ENST00000630907	SKP1	P63208	163 aa		24.68	■■□□□ 1.54
UBE3A-222	ENST00000630907	STX3	Q13277	289 aa		24.68	■■□□□ 1.54
UBE3A-222	ENST00000630907	DSG2	Q14126	1118 aa		24.68	■■□□□ 1.54
UBE3A-222	ENST00000630907	MLIP	Q5VWP3	458 aa		24.68	■■□□□ 1.54
UBE3A-222	ENST00000630907	CES4A	Q5XG92	561 aa		24.68	■■□□□ 1.54
UBE3A-222	ENST00000630907	FAM198B	Q6UWH4	519 aa		24.68	■■□□□ 1.54
UBE3A-222	ENST00000630907	PDSS2	Q86YH6	399 aa		24.68	■■□□□ 1.54
UBE3A-222	ENST00000630907	TRIM42	Q8IWZ5	723 aa		24.68	■■□□□ 1.54
UBE3A-222	ENST00000630907	SRFBP1	Q8NEF9	429 aa	Known RBP	24.68	■■□□□ 1.54
UBE3A-222	ENST00000630907	KIAA1143	Q96AT1	154 aa	Predicted RBP	24.68	■■□□□ 1.54
UBE3A-222	ENST00000630907	FAR2	Q96K12	515 aa		24.68	■■□□□ 1.54
UBE3A-222	ENST00000630907	SERPINI1	Q99574	410 aa		24.68	■■□□□ 1.54
UBE3A-222	ENST00000630907	CENPK	Q9BS16	269 aa		24.68	■■□□□ 1.54
UBE3A-222	ENST00000630907	GPN3	Q9UHW5	284 aa	Predicted RBP	24.68	■■□□□ 1.54
UBE3A-222	ENST00000630907	C21orf140	B9A014	251 aa		24.67	■■□□□ 1.54
UBE3A-222	ENST00000630907	C4orf51	C9J302	202 aa		24.67	■■□□□ 1.54
UBE3A-222	ENST00000630907	AZIN1	O14977	448 aa		24.67	■■□□□ 1.54
UBE3A-222	ENST00000630907	HSPA4L	O95757	839 aa		24.67	■■□□□ 1.54
UBE3A-222	ENST00000630907	B3GALT4	O96024	378 aa		24.67	■■□□□ 1.54
UBE3A-222	ENST00000630907	CHN1	P15882	459 aa		24.67	■■□□□ 1.54
UBE3A-222	ENST00000630907	ABCE1	P61221	599 aa	Known RBP	24.67	■■□□□ 1.54
UBE3A-222	ENST00000630907	BTN3A2	P78410	334 aa		24.67	■■□□□ 1.54
UBE3A-222	ENST00000630907	ZNF33B	Q06732	778 aa		24.67	■■□□□ 1.54
UBE3A-222	ENST00000630907	DNASE1L3	Q13609	305 aa		24.67	■■□□□ 1.54
UBE3A-222	ENST00000630907	CUL3	Q13618	768 aa		24.67	■■□□□ 1.54
UBE3A-222	ENST00000630907	ABHD17C	Q6PCB6	329 aa		24.67	■■□□□ 1.54
UBE3A-222	ENST00000630907	VASH2	Q86V25	355 aa		24.67	■■□□□ 1.54
UBE3A-222	ENST00000630907	DCBLD2	Q96PD2	775 aa		24.67	■■□□□ 1.54
UBE3A-222	ENST00000630907	GPN2	Q9H9Y4	310 aa	Predicted RBP	24.67	■■□□□ 1.54
UBE3A-222	ENST00000630907	CHD8	Q9HCK8	2581 aa		24.67	■■□□□ 1.54
UBE3A-222	ENST00000630907	IGF2R	P11717	2491 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907		A0A088AWK7	358 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907		A0A0G2JN53	185 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	SAP18	O00422	153 aa	Known RBP	24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	TERT	O14746	1132 aa	Known RBP	24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	ITM2A	O43736	263 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	ETHE1	O95571	254 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	FGF4	P08620	206 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	RAB40AL	P0C0E4	278 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	NR1D1	P20393	614 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	ZNF10	P21506	573 aa	Predicted RBP	24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	SERPINB3	P29508	390 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	SLC1A6	P48664	564 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	HTR6	P50406	440 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	CLEC6A	Q6EIG7	209 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	ATG14	Q6ZNE5	492 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	LRRC69	Q6ZNQ3	347 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	COX15	Q7KZN9	410 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	OVCH1	Q7RTY7	1134 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	UBE3D	Q7Z6J8	389 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	HOMEZ	Q8IX15	550 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	AMER3	Q8N944	861 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	RAB3IL1	Q8TBN0	382 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	FKBP10	Q96AY3	582 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	RGMA	Q96B86	450 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	KCNC2	Q96PR1	638 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	TBCD	Q9BTW9	1192 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	EFHD1	Q9BUP0	239 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	YIPF2	Q9BWQ6	316 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	GPR87	Q9BY21	358 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	BRF2	Q9HAW0	419 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	FARSA	Q9Y285	508 aa	Known RBP	24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	TRAF6	Q9Y4K3	522 aa		24.66	■■□□□ 1.54
UBE3A-222	ENST00000630907	ZNF860	A6NHJ4	632 aa		24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	RDH16	O75452	317 aa		24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	LYPLA1	O75608	230 aa	Predicted RBP	24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	SNUPN	O95149	360 aa	Known RBP	24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	ALB	P02768	609 aa		24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	CD63	P08962	238 aa		24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	HSD3B1	P14060	373 aa		24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	LIF	P15018	202 aa		24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	HSD3B2	P26439	372 aa		24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	RAP1GDS1	P52306	607 aa		24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	RPS15	P62841	145 aa	Known RBP	24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	BST1	Q10588	318 aa		24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	ACACA	Q13085	2346 aa		24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	NCF4	Q15080	339 aa		24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	SH2D4B	Q5SQS7	431 aa		24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	ATG16L1	Q676U5	607 aa		24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	MRPL14	Q6P1L8	145 aa	Known RBP	24.65	■■□□□ 1.54

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms