RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 TLR6Q9Y2C9 796 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 MT-ND1P03886 318 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 DSC2Q02487 901 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 SLBPQ14493 270 aaKnown RBP eCLIP12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 OR13C3Q8NGS6 347 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.78□□□□□ -0.362e-6■■■□□ 17.6
SYNGAP1-208ENST00000629380 TMEM9Q9P0T7 183 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 EXOSC1Q9Y3B2 195 aaKnown RBP12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 MDC1Q14676 2089 aaKnown RBP12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 ZNF142P52746 1687 aaPredicted RBP12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 VEGFDO43915 354 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 CCL5P13501 91 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 RAB4AP20338 218 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 REEP3Q6NUK4 255 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 FAM84AQ96KN4 292 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 PADI3Q9ULW8 664 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 GPR25O00155 361 aa12.77□□□□□ -0.36
SYNGAP1-208ENST00000629380 HCRTR2O43614 444 aa12.77□□□□□ -0.36
SYNGAP1-208ENST00000629380 GALNT11Q8NCW6 608 aa12.77□□□□□ -0.36
SYNGAP1-208ENST00000629380 C17orf113A0A1B0GUU1 675 aa12.77□□□□□ -0.36
SYNGAP1-208ENST00000629380 A0A1W2PPL8 197 aa12.77□□□□□ -0.36
SYNGAP1-208ENST00000629380 D6RAR5 112 aa12.77□□□□□ -0.36
SYNGAP1-208ENST00000629380 HOXA9P31269 272 aa12.77□□□□□ -0.36
SYNGAP1-208ENST00000629380 MTPNP58546 118 aa12.77□□□□□ -0.36
SYNGAP1-208ENST00000629380 ZNF181Q2M3W8 571 aa12.77□□□□□ -0.36
SYNGAP1-208ENST00000629380 FAM46DQ8NEK8 389 aa12.77□□□□□ -0.36
SYNGAP1-208ENST00000629380 ZFP37Q9Y6Q3 630 aaPredicted RBP12.77□□□□□ -0.36
SYNGAP1-208ENST00000629380 NOTOA8MTQ0 251 aa12.77□□□□□ -0.36
SYNGAP1-208ENST00000629380 ERI3O43414 337 aaKnown RBP12.77□□□□□ -0.36
SYNGAP1-208ENST00000629380 AHSA1O95433 338 aa12.77□□□□□ -0.36
SYNGAP1-208ENST00000629380 RIDAP52758 137 aaKnown RBP12.77□□□□□ -0.36
SYNGAP1-208ENST00000629380 FOXK1P85037 733 aa12.77□□□□□ -0.36
SYNGAP1-208ENST00000629380 TPGS2Q68CL5 300 aa12.77□□□□□ -0.36
SYNGAP1-208ENST00000629380 MARCH9Q86YJ5 346 aa12.77□□□□□ -0.36
SYNGAP1-208ENST00000629380 OR6C6A6NF89 314 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 FZD9O00144 591 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 OXTRP30559 389 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 L1CAMP32004 1257 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 SCNN1AP37088 669 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 ANKDD1AQ495B1 522 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 LNX1Q8TBB1 728 aaPredicted RBP12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 OR2B2Q9GZK3 357 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 WDR55Q9H6Y2 383 aaPredicted RBP12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 RNF6Q9Y252 685 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 PCDHGA2Q9Y5H1 932 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 MCM3APO60318 1980 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 FAM230AA0A1W2PPH8 454 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 TVP23AA6NH52 213 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 BRINP1O60477 761 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 SFTPBP07988 381 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 TNFSF9P41273 254 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 ST3GAL3Q11203 375 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 MADCAM1Q13477 382 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 GPR139Q6DWJ6 353 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 LRRTM4Q86VH4 590 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 ZNF781Q8N8C0 355 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 ASB12Q8WXK4 309 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 MALSU1Q96EH3 234 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 CD84Q9UIB8 345 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 FZD4Q9ULV1 537 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 A0A1W2PRB8 838 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 J3QLW9 94 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 ZNF19P17023 458 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 CDKN1CP49918 316 aaPredicted RBP12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 ZNF829Q3KNS6 432 aaPredicted RBP12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 PRSS58Q8IYP2 241 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 PGAP3Q96FM1 320 aaPredicted RBP12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 ARHGAP9Q9BRR9 750 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 GXYLT2A0PJZ3 443 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 CAPN3P20807 821 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 RAB41Q5JT25 222 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 FUT10Q6P4F1 479 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 KLHDC10Q6PID8 442 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 Q8N402 240 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 TSNAXQ99598 290 aaKnown RBP12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 TRMT61BQ9BVS5 477 aaKnown RBP12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 SDCBP2Q9H190 292 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 KIF13BQ9NQT8 1826 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 FAM149AA5PLN7 773 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 CHMP24386 653 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 MAGEA8P43361 318 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 DGKGP49619 791 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 TMEM35AQ53FP2 167 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 ATAD3CQ5T2N8 411 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 TSTD2Q5T7W7 516 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 SNX29P2Q8IUI4 249 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 OR56A3Q8NH54 315 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 IRF2BPLQ9H1B7 796 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 ZNF701Q9NV72 531 aaPredicted RBP12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 DHDHQ9UQ10 334 aa12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 PHRF1Q9P1Y6 1649 aaKnown RBP12.77□□□□□ -0.37
SYNGAP1-208ENST00000629380 MAGEA3P43357 314 aa12.76□□□□□ -0.37
SYNGAP1-208ENST00000629380 ENTPD1P49961 510 aa12.76□□□□□ -0.37
SYNGAP1-208ENST00000629380 CLCN2P51788 898 aa12.76□□□□□ -0.37
SYNGAP1-208ENST00000629380 ECH1Q13011 328 aa12.76□□□□□ -0.37
SYNGAP1-208ENST00000629380 GPM6BQ13491 265 aa12.76□□□□□ -0.37
SYNGAP1-208ENST00000629380 CARTPTQ16568 116 aa12.76□□□□□ -0.37
SYNGAP1-208ENST00000629380 EML3Q32P44 896 aa12.76□□□□□ -0.37
SYNGAP1-208ENST00000629380 FAM86C1Q9NVL1 165 aa12.76□□□□□ -0.37
SYNGAP1-208ENST00000629380 SCAF4O95104 1147 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms