RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 CT45A9P0DMV2 189 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 TIMP2P16035 220 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 GSK3BP49841 420 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 DSTNP60981 165 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 CT45A2Q5DJT8 189 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 CT45A1Q5HYN5 189 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 UBAP2Q5T6F2 1119 aaKnown RBP6.09□□□□□ -1.43
CDKL5-205ENST00000623535 CT45A3Q8NHU0 189 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 SNAPC3Q92966 411 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 HDAC10Q969S8 669 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 OCEL1Q9H607 264 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 TAS2R16Q9NYV7 291 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 POLHQ9Y253 713 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 KIF1AQ12756 1690 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 LSM1O15116 133 aaKnown RBP6.09□□□□□ -1.43
CDKL5-205ENST00000623535 EIF1AXP47813 144 aaKnown RBP6.09□□□□□ -1.43
CDKL5-205ENST00000623535 ST8SIA2Q92186 375 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 CEP41Q9BYV8 373 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 FBXO4Q9UKT5 387 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 COX6B1P14854 86 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 PSMA1P25786 263 aaKnown RBP6.09□□□□□ -1.43
CDKL5-205ENST00000623535 PSMB4P28070 264 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 FMO3P31513 532 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 IL10RBQ08334 325 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 GPR68Q15743 365 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 AADACL2Q6P093 401 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 Q6ZSR6 202 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 AHSA2Q719I0 299 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 ZNF461Q8TAF7 563 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 ZNF358Q9NW07 568 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 FKBP6O75344 327 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 SCGB1D2O95969 90 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 CA3P07451 260 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 HNRNPA2B1P22626 353 aaKnown RBP6.09□□□□□ -1.43
CDKL5-205ENST00000623535 GPX6P59796 221 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 CHRFAM7AQ494W8 412 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 TREML2Q5T2D2 321 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 ATAD3CQ5T2N8 411 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 SERPINA9Q86WD7 417 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 ZNF599Q96NL3 588 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 ZNF347Q96SE7 839 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 IL21RQ9HBE5 538 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 SLC6A14Q9UN76 642 aa6.09□□□□□ -1.43
CDKL5-205ENST00000623535 PROM1O43490 865 aa6.09□□□□□ -1.44
CDKL5-205ENST00000623535 BDKRB1P46663 353 aa6.09□□□□□ -1.44
CDKL5-205ENST00000623535 HSPA7P48741 367 aa6.09□□□□□ -1.44
CDKL5-205ENST00000623535 CLCNKBP51801 687 aa6.09□□□□□ -1.44
CDKL5-205ENST00000623535 NPRL3Q12980 569 aa6.09□□□□□ -1.44
CDKL5-205ENST00000623535 ZNF540Q8NDQ6 660 aa6.09□□□□□ -1.44
CDKL5-205ENST00000623535 OR7G1Q8NGA0 311 aa6.09□□□□□ -1.44
CDKL5-205ENST00000623535 S100ZQ8WXG8 99 aa6.09□□□□□ -1.44
CDKL5-205ENST00000623535 APOLD1Q96LR9 279 aa6.09□□□□□ -1.44
CDKL5-205ENST00000623535 OBP2BQ9NPH6 170 aa6.09□□□□□ -1.44
CDKL5-205ENST00000623535 FBXO6Q9NRD1 293 aaPredicted RBP6.09□□□□□ -1.44
CDKL5-205ENST00000623535 MAGEL2Q9UJ55 1249 aa6.09□□□□□ -1.44
CDKL5-205ENST00000623535 SERTM1A2A2V5 107 aa6.09□□□□□ -1.44
CDKL5-205ENST00000623535 AK1P00568 194 aa6.09□□□□□ -1.44
CDKL5-205ENST00000623535 ITGB2P05107 769 aa6.09□□□□□ -1.44
CDKL5-205ENST00000623535 OR8B8Q15620 311 aa6.09□□□□□ -1.44
CDKL5-205ENST00000623535 NT5DC1Q5TFE4 455 aa6.09□□□□□ -1.44
CDKL5-205ENST00000623535 PRAMEF17Q5VTA0 474 aa6.09□□□□□ -1.44
CDKL5-205ENST00000623535 PIAS4Q8N2W9 510 aaPredicted RBP6.09□□□□□ -1.44
CDKL5-205ENST00000623535 PTPRHQ9HD43 1115 aa6.09□□□□□ -1.44
CDKL5-205ENST00000623535 TBCCD1Q9NVR7 557 aa6.09□□□□□ -1.44
CDKL5-205ENST00000623535 GABARAPH6UMI1 98 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 ZNF780AO75290 641 aaPredicted RBP6.08□□□□□ -1.44
CDKL5-205ENST00000623535 GABARAPO95166 117 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 IFNA4P05014 189 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 ACPPP15309 386 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 FAHP16930 419 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 CSKP41240 450 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 SLC19A1P41440 591 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 MAP4K3Q8IVH8 894 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 UEVLDQ8IX04 471 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 RPLP0P6Q8NHW5 317 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 DAZAP1Q96EP5 407 aaKnown RBP6.08□□□□□ -1.44
CDKL5-205ENST00000623535 SLC47A1Q96FL8 570 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 LRR1Q96L50 414 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 DPAGT1Q9H3H5 408 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 CYTH4Q9UIA0 394 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 SQORQ9Y6N5 450 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 TSPAN12O95859 305 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 KCNA3P22001 575 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 EPHA5P54756 1037 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 PTP4A2Q12974 167 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 ZCWPW2Q504Y3 356 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 OMA1Q96E52 524 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 RPL10LQ96L21 214 aaKnown RBP6.08□□□□□ -1.44
CDKL5-205ENST00000623535 CDH22Q9UJ99 828 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 ABCG2Q9UNQ0 655 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 HES2Q9Y543 173 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 A0A0U1RQJ8 604 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 KPNA4O00629 521 aaPredicted RBP6.08□□□□□ -1.44
CDKL5-205ENST00000623535 EIF1AYO14602 144 aaKnown RBP6.08□□□□□ -1.44
CDKL5-205ENST00000623535 LYPLA1O75608 230 aaPredicted RBP6.08□□□□□ -1.44
CDKL5-205ENST00000623535 SLC22A3O75751 556 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 SNAPC5O75971 98 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 CBX6O95503 412 aa6.08□□□□□ -1.44
CDKL5-205ENST00000623535 XRCC1P18887 633 aaPredicted RBP6.08□□□□□ -1.44
CDKL5-205ENST00000623535 HTR3AP46098 478 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms