RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 CCSER2Q9H7U1 834 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 CLEC2DQ9UHP7 191 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 MOSPD1Q9UJG1 213 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 STUB1Q9UNE7 303 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 PCDHB9Q9Y5E1 797 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 PRAMEF25A6NGN4 478 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 NPIPB8E9PQR5 432 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 J3KTA2 159 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 WWP2O00308 870 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 PLA2G10O15496 165 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 AKR7A2O43488 359 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 TMCC2O75069 709 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 CSO75390 466 aaKnown RBP13.56□□□□□ -0.24
LDB3-209ENST00000623056 ALPIP09923 528 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 PCSK2P16519 638 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 HOXC8P31273 242 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 BTBD16Q32M84 506 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 IFI44LQ53G44 452 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 TIGD3Q6B0B8 471 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 KIAA1841Q6NSI8 718 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 SLC44A2Q8IWA5 706 aaPredicted RBP13.56□□□□□ -0.24
LDB3-209ENST00000623056 NAGSQ8N159 534 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 GDPD1Q8N9F7 314 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 C11orf65Q8NCR3 313 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 ANKK1Q8NFD2 765 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 ENKURQ8TC29 256 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 FCRL1Q96LA6 429 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 COQ7Q99807 217 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 UCK2Q9BZX2 261 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 ATP13A2Q9NQ11 1180 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 FTSJ1Q9UET6 329 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 AP1M2Q9Y6Q5 423 aa13.56□□□□□ -0.24
LDB3-209ENST00000623056 PIKFYVEQ9Y2I7 2098 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 ALPK3Q96L96 1907 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 C1orf226A1L170 272 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 HYKKA2RU49 373 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 FABP12A6NFH5 140 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 A8MVJ9 347 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 PCDH7O60245 1069 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 MPZL2O60487 215 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 PRMT3O60678 531 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 PIPP12273 146 aaPredicted RBP13.55□□□□□ -0.24
LDB3-209ENST00000623056 CBLP22681 906 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 CPN2P22792 545 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 ITGB7P26010 798 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 CSTF2P33240 577 aaKnown RBP eCLIP13.55□□□□□ -0.24
LDB3-209ENST00000623056 CNR2P34972 360 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 NUDT1P36639 197 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 RPIAP49247 311 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 CDH4P55283 916 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 SNRPD2P62316 118 aaKnown RBP13.55□□□□□ -0.24
LDB3-209ENST00000623056 GAB1Q13480 694 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 GPR19Q15760 415 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 FRG2Q64ET8 278 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 TRIM69Q86WT6 500 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 NLGN4YQ8NFZ3 816 aaPredicted RBP13.55□□□□□ -0.24
LDB3-209ENST00000623056 DIRAS2Q96HU8 199 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 FUBP3Q96I24 572 aaKnown RBP eCLIP13.55□□□□□ -0.24
LDB3-209ENST00000623056 FRG2BQ96QU4 278 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 MAPKAP1Q9BPZ7 522 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 NIPAL2Q9H841 368 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 TMEM39AQ9NV64 488 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 FLRT1Q9NZU1 646 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 AFF4Q9UHB7 1163 aaKnown RBP13.55□□□□□ -0.24
LDB3-209ENST00000623056 MAPRE3Q9UPY8 281 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 A0A1W2PQL4 384 aaPredicted RBP13.55□□□□□ -0.24
LDB3-209ENST00000623056 ZAR1LA6NP61 321 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 POLR1CO15160 346 aaPredicted RBP13.55□□□□□ -0.24
LDB3-209ENST00000623056 PRAMEF4O60810 478 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 ENTPD6O75354 484 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 CDRT1O95170 752 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 M6PRP20645 277 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 ALAS2P22557 587 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 GPC1P35052 558 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 FOXD4Q12950 439 aaPredicted RBP13.55□□□□□ -0.24
LDB3-209ENST00000623056 NFATC2Q13469 925 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 MADCAM1Q13477 382 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 SPHARQ15513 63 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 TEAD4Q15561 434 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 TATDN3Q17R31 274 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.55□□□□□ -0.24
LDB3-209ENST00000623056 PYDC2Q56P42 97 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 PRAMEF9Q5VWM5 478 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 NCEH1Q6PIU2 408 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 LINGO4Q6UY18 593 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 LRRC70Q7Z2Q7 622 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 SLC34A3Q8N130 599 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 L3MBTL4Q8NA19 623 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 ATAD1Q8NBU5 361 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 CREB3L4Q8TEY5 395 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 SLC25A46Q96AG3 418 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 UROC1Q96N76 676 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 DUSP26Q9BV47 211 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 NDUFB11Q9NX14 153 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 TMPRSS11EQ9UL52 423 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 PRELID1Q9Y255 219 aa13.55□□□□□ -0.24
LDB3-209ENST00000623056 MEN1O00255 615 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 C1QBP02746 253 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 RHOCP08134 193 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 TSPAN19P0C672 248 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms