RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 KRT20P35900 424 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 GPR1P46091 355 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 MASP1P48740 699 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 PCBP3P57721 371 aaKnown RBP9.04□□□□□ -0.96
PDPN-212ENST00000621990 HIST2H2ACQ16777 129 aaPredicted RBP9.04□□□□□ -0.96
PDPN-212ENST00000621990 CRB2Q5IJ48 1285 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 GCNT6Q5T4J0 391 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 HIST2H2AA3Q6FI13 130 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 VN1R5Q7Z5H4 357 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 FAM129CQ86XR2 697 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 SMYD1Q8NB12 490 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 OR4K1Q8NGD4 311 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 WDR48Q8TAF3 677 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 OR8D1Q8WZ84 308 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 RORBQ92753 470 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 PPCDCQ96CD2 204 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 COX14Q96I36 57 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 FAM129BQ96TA1 746 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 PSD2Q9BQI7 771 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 SLC35A5Q9BS91 424 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 OR52A5Q9H2C5 316 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 SPNS1Q9H2V7 528 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 TMEM245Q9H330 911 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 FAIMQ9NVQ4 179 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 ICKQ9UPZ9 632 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 PCDHGA6Q9Y5G7 932 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 PDE4DIPQ5VU43 2346 aa9.04□□□□□ -0.96
PDPN-212ENST00000621990 PI15O43692 258 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 POP7O75817 140 aaKnown RBP9.03□□□□□ -0.96
PDPN-212ENST00000621990 C6orf47O95873 294 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 NTRK1P04629 796 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 ETFAP13804 333 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 FSHRP23945 695 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 RRM2P31350 389 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 C21orf59P57076 290 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 TEKQ02763 1124 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 RPA4Q13156 261 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 EIF4HQ15056 248 aaKnown RBP9.03□□□□□ -0.96
PDPN-212ENST00000621990 RAET1GQ6H3X3 334 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 LCTLQ6UWM7 567 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 ENTHD1Q8IYW4 607 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 PARP8Q8N3A8 854 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 CIDECQ96AQ7 238 aaPredicted RBP9.03□□□□□ -0.96
PDPN-212ENST00000621990 TAMM41Q96BW9 452 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 MYOCQ99972 504 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 ACOT13Q9NPJ3 140 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 TAS2R9Q9NYW1 312 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 RAPGEFL1Q9UHV5 662 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 ALPK3Q96L96 1907 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 PRAMEF25A6NGN4 478 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 RGS10O43665 173 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 TGFB1P01137 390 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 HLA-EP13747 358 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 AQP1P29972 269 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 CRATP43155 626 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 LIMS1P48059 325 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 HTRA3P83110 453 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 SMN1Q16637 294 aaKnown RBP9.03□□□□□ -0.96
PDPN-212ENST00000621990 PRSS53Q2L4Q9 553 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 ZNF630Q2M218 657 aaPredicted RBP9.03□□□□□ -0.96
PDPN-212ENST00000621990 IFI44LQ53G44 452 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 TRIM40Q6P9F5 258 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 ADAMTSL4Q6UY14 1074 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 FAM83HQ6ZRV2 1179 aaPredicted RBP9.03□□□□□ -0.96
PDPN-212ENST00000621990 PDZD3Q86UT5 571 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.03□□□□□ -0.96
PDPN-212ENST00000621990 SVOPQ8N4V2 548 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 SLC15A4Q8N697 577 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 ABHD11Q8NFV4 315 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 VMP1Q96GC9 406 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 PPP1R16AQ96I34 528 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 ZNF300Q96RE9 604 aaPredicted RBP9.03□□□□□ -0.96
PDPN-212ENST00000621990 CCDC90BQ9GZT6 254 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 RHBGQ9H310 441 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 OR51B5Q9H339 312 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 EPS8L2Q9H6S3 715 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 PLCXD1Q9NUJ7 323 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 TMEM184CQ9NVA4 438 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 AASSQ9UDR5 926 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 MRPS23Q9Y3D9 190 aaKnown RBP9.03□□□□□ -0.96
PDPN-212ENST00000621990 TBX19O60806 448 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 MMP20O60882 483 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 PFDN1O60925 122 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 MT-ND2P03891 347 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 GGT2P36268 569 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 HMGA2P52926 109 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 TAS2R50P59544 299 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 PHEXP78562 749 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 MC1RQ01726 317 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 C2orf80Q0P641 193 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 PPIGQ13427 754 aaKnown RBP eCLIP9.03□□□□□ -0.96
PDPN-212ENST00000621990 TMED1Q13445 227 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 SCARB2Q14108 478 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 NFE2L1Q14494 772 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 STARD3Q14849 445 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 CLCA4Q14CN2 919 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 SLC5A12Q1EHB4 618 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 FNDC3BQ53EP0 1204 aaKnown RBP9.03□□□□□ -0.96
PDPN-212ENST00000621990 PRAMEF14Q5SWL7 426 aa9.03□□□□□ -0.96
PDPN-212ENST00000621990 UBE2UQ5VVX9 321 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms