RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 FBXO10Q9UK96 956 aa13.51□□□□□ -0.25
SSBP2-220ENST00000615665 KMOO15229 486 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 VEGFDO43915 354 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 TPST2O60704 377 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 TNFRSF21O75509 655 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 NKX3-2P78367 333 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 GRIN2CQ14957 1233 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 SNAPC1Q16533 368 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 CEP78Q5JTW2 689 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 REEP3Q6NUK4 255 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 DLEU7Q6UYE1 221 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 GPR65Q8IYL9 337 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 NUDT8Q8WV74 236 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 SLC38A4Q969I6 547 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 MAL2Q969L2 176 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 RERGQ96A58 199 aaPredicted RBP13.5□□□□□ -0.25
SSBP2-220ENST00000615665 ITPAQ9BY32 194 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 ZNF701M0R085 212 aaPredicted RBP13.5□□□□□ -0.25
SSBP2-220ENST00000615665 ALPLP05186 524 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 ETFAP13804 333 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 VIPR2P41587 438 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 CRISP3P54108 245 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 TARDBPQ13148 414 aaKnown RBP eCLIP13.5□□□□□ -0.252e-6■■□□□ 12.3
SSBP2-220ENST00000615665 CYP27C1Q4G0S4 372 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 LIPIQ6XZB0 460 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 ZNF730Q6ZMV8 503 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 C12orf76Q8N812 135 aaPredicted RBP13.5□□□□□ -0.25
SSBP2-220ENST00000615665 AQP11Q8NBQ7 271 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 P2RX2Q9UBL9 471 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 ACSL6Q9UKU0 697 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 H3BMQ9 156 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 TFECO14948 347 aaPredicted RBP13.5□□□□□ -0.25
SSBP2-220ENST00000615665 NPRL3Q12980 569 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 PLEKHM3Q6ZWE6 761 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 GATAD2AQ86YP4 633 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 DCP2Q8IU60 420 aaKnown RBP13.5□□□□□ -0.25
SSBP2-220ENST00000615665 COG8Q96MW5 612 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 ALPK1Q96QP1 1244 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 HCN4Q9Y3Q4 1203 aa13.5□□□□□ -0.25
SSBP2-220ENST00000615665 H7BY64 318 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 INMTO95050 263 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 LHCGRP22888 699 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 MAP2K4P45985 399 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 RAPSNQ13702 412 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 APOFQ13790 326 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 EIF4HQ15056 248 aaKnown RBP13.49□□□□□ -0.25
SSBP2-220ENST00000615665 CATSPEREQ5SY80 951 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 CPZQ66K79 652 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 OR52L1Q8NGH7 329 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 NEIL2Q969S2 332 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 PRAP1Q96NZ9 151 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 LHPPQ9H008 270 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 PCDHGA8Q9Y5G5 932 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 OTOFQ9HC10 1997 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 CAPN5O15484 640 aaPredicted RBP13.49□□□□□ -0.25
SSBP2-220ENST00000615665 ERI3O43414 337 aaKnown RBP13.49□□□□□ -0.25
SSBP2-220ENST00000615665 MT-ND2P03891 347 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 H1F0P07305 194 aaKnown RBP13.49□□□□□ -0.25
SSBP2-220ENST00000615665 EPCAMP16422 314 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 UQCRC2P22695 453 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 PSMA1P25786 263 aaKnown RBP13.49□□□□□ -0.25
SSBP2-220ENST00000615665 STXBP1P61764 594 aaKnown RBP13.49□□□□□ -0.25
SSBP2-220ENST00000615665 NFATC3Q12968 1075 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 NFE2L1Q14494 772 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 ATAT1Q5SQI0 421 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 FAM129CQ86XR2 697 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 VRK3Q8IV63 474 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 FLCNQ8NFG4 579 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 HMGCLL1Q8TB92 370 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 IL4I1Q96RQ9 567 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 MAPKAP1Q9BPZ7 522 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 DCSTAMPQ9H295 470 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 CTPS2Q9NRF8 586 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 KCNK6Q9Y257 313 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 BTBD3Q9Y2F9 522 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 ANK1P16157 1881 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 SCN4AP35499 1836 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 LCTP09848 1927 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 ITGA1P56199 1179 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 RGS8P57771 180 aaPredicted RBP13.49□□□□□ -0.25
SSBP2-220ENST00000615665 PARS2Q7L3T8 475 aaKnown RBP13.49□□□□□ -0.25
SSBP2-220ENST00000615665 ZNF438Q7Z4V0 828 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 C10orf53Q8N6V4 93 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 L3MBTL4Q8NA19 623 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 C9orf43Q8TAL5 461 aaPredicted RBP13.49□□□□□ -0.25
SSBP2-220ENST00000615665 SETD7Q8WTS6 366 aaKnown RBP13.49□□□□□ -0.25
SSBP2-220ENST00000615665 DEPDC7Q96QD5 511 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 FUNDC2Q9BWH2 189 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 ZBP1Q9H171 429 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 RHCGQ9UBD6 479 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 MSRAQ9UJ68 235 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 HSPE1-MOB4S4R3N1 261 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 BRCA1P38398 1863 aaKnown RBP13.49□□□□□ -0.25
SSBP2-220ENST00000615665 CCT3P49368 545 aaKnown RBP13.49□□□□□ -0.25
SSBP2-220ENST00000615665 LRRC32Q14392 662 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 RGNQ15493 299 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 IER5LQ5T953 404 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 C19orf18Q8NEA5 215 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 SLC9A6Q92581 669 aa13.49□□□□□ -0.25
SSBP2-220ENST00000615665 YIPF4Q9BSR8 244 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms