RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 HJURPQ8NCD3 748 aaPredicted RBP21.49■■□□□ 1.03
SHANK2-220ENST00000608988 PSD4Q8NDX1 1056 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 FAM46DQ8NEK8 389 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 OR52N2Q8NGI0 321 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 ASB15Q8WXK1 588 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 RIPOR3Q96MK2 946 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 KLF16Q9BXK1 252 aaPredicted RBP21.49■■□□□ 1.03
SHANK2-220ENST00000608988 SRRQ9GZT4 340 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 SLC25A19Q9HC21 320 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 PRDM8Q9NQV8 689 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 AFF4Q9UHB7 1163 aaKnown RBP21.49■■□□□ 1.03
SHANK2-220ENST00000608988 SNX7Q9UNH6 387 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 SNX8Q9Y5X2 465 aa21.49■■□□□ 1.03
SHANK2-220ENST00000608988 GABRR3A8MPY1 467 aa21.48■■□□□ 1.03
SHANK2-220ENST00000608988 ZNF670-ZNF695F2Z2N8 137 aa21.48■■□□□ 1.03
SHANK2-220ENST00000608988 ITGB7P26010 798 aa21.48■■□□□ 1.03
SHANK2-220ENST00000608988 CRISP3P54108 245 aa21.48■■□□□ 1.03
SHANK2-220ENST00000608988 PSPHP78330 225 aa21.48■■□□□ 1.03
SHANK2-220ENST00000608988 PTGES3Q15185 160 aaKnown RBP21.48■■□□□ 1.03
SHANK2-220ENST00000608988 TBRG1Q3YBR2 411 aa21.48■■□□□ 1.03
SHANK2-220ENST00000608988 SPIN4Q56A73 249 aa21.48■■□□□ 1.03
SHANK2-220ENST00000608988 CRB2Q5IJ48 1285 aa21.48■■□□□ 1.03
SHANK2-220ENST00000608988 GRHL2Q6ISB3 625 aa21.48■■□□□ 1.03
SHANK2-220ENST00000608988 ANKS3Q6ZW76 656 aa21.48■■□□□ 1.03
SHANK2-220ENST00000608988 RASGRP3Q8IV61 690 aa21.48■■□□□ 1.03
SHANK2-220ENST00000608988 IL17RCQ8NAC3 791 aa21.48■■□□□ 1.03
SHANK2-220ENST00000608988 GPR62Q9BZJ7 368 aa21.48■■□□□ 1.03
SHANK2-220ENST00000608988 ATP6V1HQ9UI12 483 aa21.48■■□□□ 1.03
SHANK2-220ENST00000608988 STUB1Q9UNE7 303 aa21.48■■□□□ 1.03
SHANK2-220ENST00000608988 LSM2Q9Y333 95 aaKnown RBP21.48■■□□□ 1.03
SHANK2-220ENST00000608988 TBL1XO60907 577 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 LGI1O95970 557 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 IDSP22304 550 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 TUFMP49411 452 aaKnown RBP21.47■■□□□ 1.03
SHANK2-220ENST00000608988 CRISP1P54107 249 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 GNG2P59768 71 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 PFN3P60673 137 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 GAB1Q13480 694 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 NCF4Q15080 339 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 TMEM201Q5SNT2 666 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 GATAD2AQ86YP4 633 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 OR4A15Q8NGL6 344 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 KIAA1143Q96AT1 154 aaPredicted RBP21.47■■□□□ 1.03
SHANK2-220ENST00000608988 FAM129BQ96TA1 746 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 HHATLQ9HCP6 504 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 CMAHPQ9Y471 501 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 MAU2Q9Y6X3 613 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 IL7P13232 177 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 PSMA1P25786 263 aaKnown RBP21.47■■□□□ 1.03
SHANK2-220ENST00000608988 AQP1P29972 269 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 PNLIPRP1P54315 467 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 ZNF630Q2M218 657 aaPredicted RBP21.47■■□□□ 1.03
SHANK2-220ENST00000608988 XKRXQ6PP77 449 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 RSPO2Q6UXX9 243 aaPredicted RBP21.47■■□□□ 1.03
SHANK2-220ENST00000608988 BBS7Q8IWZ6 715 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 OXR1Q8N573 874 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 OR9Q1Q8NGQ5 310 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 SLC7A6Q92536 515 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 ALG14Q96F25 216 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 RNF170Q96K19 258 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 TMEM246Q9BRR3 403 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 C2orf49Q9BVC5 232 aaPredicted RBP21.47■■□□□ 1.03
SHANK2-220ENST00000608988 NMRK2Q9NPI5 230 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 ACER3Q9NUN7 267 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 TRPM5Q9NZQ8 1165 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 NDOR1Q9UHB4 597 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 ENPP4Q9Y6X5 453 aa21.47■■□□□ 1.03
SHANK2-220ENST00000608988 PCDH7O60245 1069 aa21.46■■□□□ 1.03
SHANK2-220ENST00000608988 ALPPP05187 535 aa21.46■■□□□ 1.03
SHANK2-220ENST00000608988 CYBAP13498 195 aa21.46■■□□□ 1.03
SHANK2-220ENST00000608988 RHCEP18577 417 aa21.46■■□□□ 1.03
SHANK2-220ENST00000608988 RPS19P39019 145 aaKnown RBP21.46■■□□□ 1.03
SHANK2-220ENST00000608988 MLLT3P42568 568 aaPredicted RBP21.46■■□□□ 1.03
SHANK2-220ENST00000608988 SCARB2Q14108 478 aa21.46■■□□□ 1.03
SHANK2-220ENST00000608988 NOXA1Q86UR1 476 aa21.46■■□□□ 1.03
SHANK2-220ENST00000608988 LIX1LQ8IVB5 337 aa21.46■■□□□ 1.03
SHANK2-220ENST00000608988 RDH10Q8IZV5 341 aa21.46■■□□□ 1.03
SHANK2-220ENST00000608988 GDPD1Q8N9F7 314 aa21.46■■□□□ 1.03
SHANK2-220ENST00000608988 KLHL6Q8WZ60 621 aa21.46■■□□□ 1.03
SHANK2-220ENST00000608988 CLP1Q92989 425 aaKnown RBP21.46■■□□□ 1.03
SHANK2-220ENST00000608988 MAL2Q969L2 176 aa21.46■■□□□ 1.03
SHANK2-220ENST00000608988 CNPPD1Q9BV87 410 aa21.46■■□□□ 1.03
SHANK2-220ENST00000608988 MND1Q9BWT6 205 aa21.46■■□□□ 1.03
SHANK2-220ENST00000608988 RNF38Q9H0F5 515 aa21.46■■□□□ 1.03
SHANK2-220ENST00000608988 ABCG8Q9H221 673 aa21.46■■□□□ 1.03
SHANK2-220ENST00000608988 CCDC182A6NF36 153 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 NOTOA8MTQ0 251 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 FADS2P1A8MWK0 482 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 NT5C1B-RDH14C9J2C7 533 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 TRIM3O75382 744 aaPredicted RBP21.45■■□□□ 1.02
SHANK2-220ENST00000608988 ANXA4P09525 319 aaPredicted RBP21.45■■□□□ 1.02
SHANK2-220ENST00000608988 ITPKAP23677 461 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 RPL3P39023 403 aaKnown RBP21.45■■□□□ 1.02
SHANK2-220ENST00000608988 CSKP41240 450 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 MVDP53602 400 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 RAE1P78406 368 aaKnown RBP21.45■■□□□ 1.02
SHANK2-220ENST00000608988 B4GALNT1Q00973 533 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 YIF1BQ5BJH7 314 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 XKR6Q5GH73 641 aa21.45■■□□□ 1.02
SHANK2-220ENST00000608988 FRMPD2BQ6IN97 320 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms