RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 OR2W5A6NFC9 320 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 MASP2O00187 686 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 PRPF4O43172 522 aaKnown RBP eCLIP18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 DNAJB5O75953 348 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 TSPAN8P19075 237 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 IMPDH1P20839 514 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 OTX2P32243 289 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 PIK3CGP48736 1102 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 CDH13P55290 713 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 POLE2P56282 527 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 OLR1P78380 273 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 CHAF1BQ13112 559 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 GGTA1PQ4G0N0 100 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 LETMD1Q6P1Q0 360 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 ABHD17CQ6PCB6 329 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 KIRREL2Q6UWL6 708 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 ZYG11AQ6WRX3 759 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 MED25Q71SY5 747 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 HUS1BQ8NHY5 278 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 APOBEC4Q8WW27 367 aaKnown RBP18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 GAL3ST3Q96A11 431 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 NACC2Q96BF6 587 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 F2RL3Q96RI0 385 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 ZNF717Q9BY31 904 aaPredicted RBP18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 GSTO2Q9H4Y5 243 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 ACTR8Q9H981 624 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 PRDM7Q9NQW5 492 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 C14orf105Q9NVL8 296 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 MAN2B2Q9Y2E5 1009 aa18.43■□□□□ 0.54
SHKBP1-221ENST00000599833 ANKDD1BA6NHY2 528 aa18.42■□□□□ 0.54
SHKBP1-221ENST00000599833 ETHE1O95571 254 aa18.42■□□□□ 0.54
SHKBP1-221ENST00000599833 IFFO1Q0D2I5 559 aa18.42■□□□□ 0.54
SHKBP1-221ENST00000599833 RUNX2Q13950 521 aa18.42■□□□□ 0.54
SHKBP1-221ENST00000599833 LY6DQ14210 128 aa18.42■□□□□ 0.54
SHKBP1-221ENST00000599833 TMEM205Q6UW68 189 aa18.42■□□□□ 0.54
SHKBP1-221ENST00000599833 ZNF793Q6ZN11 406 aa18.42■□□□□ 0.54
SHKBP1-221ENST00000599833 ABHD13Q7L211 337 aa18.42■□□□□ 0.54
SHKBP1-221ENST00000599833 PRSS58Q8IYP2 241 aa18.42■□□□□ 0.54
SHKBP1-221ENST00000599833 AMER2Q8N7J2 671 aa18.42■□□□□ 0.54
SHKBP1-221ENST00000599833 OR2L5Q8NG80 312 aa18.42■□□□□ 0.54
SHKBP1-221ENST00000599833 OR4F6Q8NGB9 312 aa18.42■□□□□ 0.54
SHKBP1-221ENST00000599833 APOPT1Q96IL0 206 aa18.42■□□□□ 0.54
SHKBP1-221ENST00000599833 CRB3Q9BUF7 120 aa18.42■□□□□ 0.54
SHKBP1-221ENST00000599833 VN1R1Q9GZP7 353 aa18.42■□□□□ 0.54
SHKBP1-221ENST00000599833 REXO4Q9GZR2 422 aaKnown RBP18.42■□□□□ 0.54
SHKBP1-221ENST00000599833 SEMA4BQ9NPR2 832 aaPredicted RBP18.42■□□□□ 0.54
SHKBP1-221ENST00000599833 DMRT3Q9NQL9 472 aa18.42■□□□□ 0.54
SHKBP1-221ENST00000599833 SEMA3GQ9NS98 782 aa18.42■□□□□ 0.54
SHKBP1-221ENST00000599833 P4HTMQ9NXG6 502 aa18.42■□□□□ 0.54
SHKBP1-221ENST00000599833 GRID1Q9ULK0 1009 aa18.42■□□□□ 0.54
SHKBP1-221ENST00000599833 ANGPTL3Q9Y5C1 460 aa18.42■□□□□ 0.54
SHKBP1-221ENST00000599833 TNRC6AQ8NDV7 1962 aaKnown RBP18.42■□□□□ 0.54
SHKBP1-221ENST00000599833 LOC102723996A0A087X1L8 192 aa18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 A0A0G2JN53 185 aa18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 CCDC151A5D8V7 595 aa18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 ARGFXA6NJG6 315 aa18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 IDSB3KWA1 339 aa18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 CTIFO43310 598 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 ERI3O43414 337 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 CHST10O43529 356 aa18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 TYROBPO43914 113 aa18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 CEACAM4O75871 244 aa18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 C1QL1O75973 258 aa18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 SCELO95171 688 aa18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 CLDN9O95484 217 aa18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 TAC1P20366 129 aa18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 PIK3CBP42338 1070 aa18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 XCR1P46094 333 aa18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 STXBP1P61764 594 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 RHAGQ02094 409 aa18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 OCA2Q04671 838 aa18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 CCDC153Q494R4 210 aa18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 RAB43Q86YS6 212 aa18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 CA13Q8N1Q1 262 aa18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 UBE2E3Q969T4 207 aa18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 C3orf18Q9UK00 162 aa18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 PLLPQ9Y342 182 aa18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 CLDN16Q9Y5I7 305 aa18.41■□□□□ 0.54
SHKBP1-221ENST00000599833 MAGEB17A8MXT2 336 aa18.4■□□□□ 0.54
SHKBP1-221ENST00000599833 K7EM74 188 aa18.4■□□□□ 0.54
SHKBP1-221ENST00000599833 UBFD1O14562 309 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-221ENST00000599833 COPEO14579 308 aa18.4■□□□□ 0.54
SHKBP1-221ENST00000599833 SERPINB1P30740 379 aa18.4■□□□□ 0.54
SHKBP1-221ENST00000599833 CCR10P46092 362 aa18.4■□□□□ 0.54
SHKBP1-221ENST00000599833 CCT5P48643 541 aa18.4■□□□□ 0.54
SHKBP1-221ENST00000599833 NEK2P51955 445 aa18.4■□□□□ 0.54
SHKBP1-221ENST00000599833 CCNG1P51959 295 aa18.4■□□□□ 0.54
SHKBP1-221ENST00000599833 CLCQ05315 142 aa18.4■□□□□ 0.54
SHKBP1-221ENST00000599833 PCLAFQ15004 111 aa18.4■□□□□ 0.54
SHKBP1-221ENST00000599833 ZRSR2Q15696 482 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-221ENST00000599833 CPSF6Q16630 551 aaKnown RBP eCLIP18.4■□□□□ 0.54
SHKBP1-221ENST00000599833 HIST2H2ACQ16777 129 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-221ENST00000599833 DEPDC1Q5TB30 811 aa18.4■□□□□ 0.54
SHKBP1-221ENST00000599833 HIST2H2AA3Q6FI13 130 aa18.4■□□□□ 0.54
SHKBP1-221ENST00000599833 SLC22A9Q8IVM8 553 aa18.4■□□□□ 0.54
SHKBP1-221ENST00000599833 SRRM1Q8IYB3 904 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-221ENST00000599833 OR11G2Q8NGC1 345 aa18.4■□□□□ 0.54
SHKBP1-221ENST00000599833 TRPC4APQ8TEL6 797 aa18.4■□□□□ 0.54
SHKBP1-221ENST00000599833 C8orf44Q96CB5 159 aa18.4■□□□□ 0.54
SHKBP1-221ENST00000599833 PEX11GQ96HA9 241 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms