RNA–Protein interactions for RNA: ENST00000599040.5

FARP1-226, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-226ENST00000599040 TAGLN3Q9UI15 199 aa8.97□□□□□ -0.97
FARP1-226ENST00000599040 ZNF490Q9ULM2 529 aaPredicted RBP8.97□□□□□ -0.97
FARP1-226ENST00000599040 TIMM22Q9Y584 194 aa8.97□□□□□ -0.97
FARP1-226ENST00000599040 PCDHGA6Q9Y5G7 932 aa8.97□□□□□ -0.97
FARP1-226ENST00000599040 DNAJC15Q9Y5T4 150 aa8.97□□□□□ -0.97
FARP1-226ENST00000599040 CFAP20Q9Y6A4 193 aaKnown RBP8.97□□□□□ -0.97
FARP1-226ENST00000599040 ANKRD12Q6UB98 2062 aa8.96□□□□□ -0.97
FARP1-226ENST00000599040 IGHV5-51A0A0C4DH38 117 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 MKRN2OSH3BPM6 223 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 MANBAO00462 879 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 CPNE3O75131 537 aaKnown RBP8.96□□□□□ -0.98
FARP1-226ENST00000599040 ZNF28P17035 718 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 HRH2P25021 359 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 CASP2P42575 452 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 RPS15P62841 145 aaKnown RBP8.96□□□□□ -0.98
FARP1-226ENST00000599040 ERVK-8P63133 956 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 CSTF3Q12996 717 aaKnown RBP8.96□□□□□ -0.98
FARP1-226ENST00000599040 STX5Q13190 355 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 DNASE1L3Q13609 305 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 CPSF6Q16630 551 aaKnown RBP eCLIP8.96□□□□□ -0.98
FARP1-226ENST00000599040 C18orf21Q32NC0 220 aaPredicted RBP8.96□□□□□ -0.98
FARP1-226ENST00000599040 DNAL1Q4LDG9 190 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 ATG9BQ674R7 924 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 GRHL2Q6ISB3 625 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 LETMD1Q6P1Q0 360 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 MED27Q6P2C8 311 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 SPNS2Q8IVW8 549 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 MIER2Q8N344 545 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 D2HGDHQ8N465 521 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 CPSF7Q8N684 471 aaKnown RBP8.96□□□□□ -0.98
FARP1-226ENST00000599040 SPDYE1Q8NFV5 336 aaPredicted RBP8.96□□□□□ -0.98
FARP1-226ENST00000599040 OR2L8Q8NGY9 312 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 SLC5A11Q8WWX8 675 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 LCN9Q8WX39 176 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 METTL2AQ96IZ6 378 aaKnown RBP8.96□□□□□ -0.98
FARP1-226ENST00000599040 CDK15Q96Q40 435 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 OR52B2Q96RD2 323 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 KCNA7Q96RP8 456 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 INSM2Q96T92 566 aaPredicted RBP8.96□□□□□ -0.98
FARP1-226ENST00000599040 MAP3K3Q99759 626 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 AIF1LQ9BQI0 150 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 CENPKQ9BS16 269 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 SGPP1Q9BX95 441 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 TRIM4Q9C037 500 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 TWSG1Q9GZX9 223 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 SRMSQ9H3Y6 488 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 PELI2Q9HAT8 420 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 LHX9Q9NQ69 397 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 FGF21Q9NSA1 209 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 TMEM45AQ9NWC5 275 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 NOP53Q9NZM5 478 aaKnown RBP8.96□□□□□ -0.98
FARP1-226ENST00000599040 OR6C2Q9NZP2 312 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 MAPRE3Q9UPY8 281 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 BTRCQ9Y297 605 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 TMED5Q9Y3A6 229 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 RNF11Q9Y3C5 154 aa8.96□□□□□ -0.98
FARP1-226ENST00000599040 SERTM1A2A2V5 107 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 PIPSLA2A3N6 862 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 OR6C74A6NCV1 312 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 E7ENX8 843 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 PSMD12O00232 456 aaPredicted RBP8.95□□□□□ -0.98
FARP1-226ENST00000599040 FFAR3O14843 346 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 GYG2O15488 501 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 GPR42O15529 346 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 PEX11AO75192 247 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 CREG1O75629 220 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 SCRG1O75711 98 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 KLK3P07288 261 aaPredicted RBP8.95□□□□□ -0.98
FARP1-226ENST00000599040 C1GALT1C1LP0DN25 315 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 CDH3P22223 829 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 PTPN4P29074 926 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 CMPK1P30085 196 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 SCTRP47872 440 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 CCR8P51685 355 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 ABATP80404 500 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 TAP2Q03519 686 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 TLE1Q04724 770 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 PCDH1Q08174 1060 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 KLF10Q13118 480 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 CYLC2Q14093 348 aaPredicted RBP8.95□□□□□ -0.98
FARP1-226ENST00000599040 DOC2AQ14183 400 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 ERV3-1Q14264 604 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 HERC3Q15034 1050 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 UGT3A2Q3SY77 523 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 MMEL1Q495T6 779 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 GALNTL6Q49A17 601 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 FRG2Q64ET8 278 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 OGFOD2Q6N063 350 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 PWWP2BQ6NUJ5 590 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 LARP4Q71RC2 724 aaKnown RBP eCLIP8.95□□□□□ -0.98
FARP1-226ENST00000599040 MAVSQ7Z434 540 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 TMPRSS11BQ86T26 416 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 PTRH1Q86Y79 214 aaKnown RBP8.95□□□□□ -0.98
FARP1-226ENST00000599040 TMEM126BQ8IUX1 230 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 TTLQ8NG68 377 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 RP9Q8TA86 221 aaKnown RBP8.95□□□□□ -0.98
FARP1-226ENST00000599040 HMGCLL1Q8TB92 370 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 CT55Q8WUE5 264 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 THAP4Q8WY91 577 aa8.95□□□□□ -0.98
FARP1-226ENST00000599040 MCUR1Q96AQ8 359 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms