RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 FAM227AF5H4B4 570 aa14.52□□□□□ -0.08
USE1-206ENST00000595101 G3V2L1 256 aa14.52□□□□□ -0.08
USE1-206ENST00000595101 RTCAO00442 366 aaKnown RBP14.52□□□□□ -0.08
USE1-206ENST00000595101 ERI3O43414 337 aaKnown RBP14.52□□□□□ -0.08
USE1-206ENST00000595101 CHST10O43529 356 aa14.52□□□□□ -0.08
USE1-206ENST00000595101 CLEC3AO75596 197 aa14.52□□□□□ -0.08
USE1-206ENST00000595101 PDGFAP04085 211 aa14.52□□□□□ -0.08
USE1-206ENST00000595101 RPS17P08708 135 aaKnown RBP14.52□□□□□ -0.08
USE1-206ENST00000595101 CD63P08962 238 aa14.52□□□□□ -0.08
USE1-206ENST00000595101 CREB1P16220 341 aa14.52□□□□□ -0.08
USE1-206ENST00000595101 KCNAB2Q13303 367 aa14.52□□□□□ -0.08
USE1-206ENST00000595101 DDX39BQ13838 428 aaKnown RBP14.52□□□□□ -0.08
USE1-206ENST00000595101 UNC50Q53HI1 259 aa14.52□□□□□ -0.08
USE1-206ENST00000595101 MED27Q6P2C8 311 aa14.52□□□□□ -0.08
USE1-206ENST00000595101 ABHD13Q7L211 337 aa14.52□□□□□ -0.08
USE1-206ENST00000595101 RAB43Q86YS6 212 aa14.52□□□□□ -0.08
USE1-206ENST00000595101 APLFQ8IW19 511 aaPredicted RBP14.52□□□□□ -0.08
USE1-206ENST00000595101 MTFMTQ96DP5 389 aaKnown RBP14.52□□□□□ -0.08
USE1-206ENST00000595101 WBP1Q96G27 269 aa14.52□□□□□ -0.08
USE1-206ENST00000595101 VN1R1Q9GZP7 353 aa14.52□□□□□ -0.08
USE1-206ENST00000595101 REXO4Q9GZR2 422 aaKnown RBP14.52□□□□□ -0.08
USE1-206ENST00000595101 PPCSQ9HAB8 311 aa14.52□□□□□ -0.08
USE1-206ENST00000595101 DCDC2Q9UHG0 476 aa14.52□□□□□ -0.08
USE1-206ENST00000595101 NXT1Q9UKK6 140 aaKnown RBP14.52□□□□□ -0.08
USE1-206ENST00000595101 PROCP04070 461 aa14.52□□□□□ -0.09
USE1-206ENST00000595101 GSTA1P08263 222 aa14.52□□□□□ -0.09
USE1-206ENST00000595101 EMP2P54851 167 aa14.52□□□□□ -0.09
USE1-206ENST00000595101 SLC18A2Q05940 514 aa14.52□□□□□ -0.09
USE1-206ENST00000595101 TRAF3Q13114 568 aa14.52□□□□□ -0.09
USE1-206ENST00000595101 LAPTM5Q13571 262 aa14.52□□□□□ -0.09
USE1-206ENST00000595101 RUNX2Q13950 521 aa14.52□□□□□ -0.09
USE1-206ENST00000595101 HIST2H2ACQ16777 129 aaPredicted RBP14.52□□□□□ -0.09
USE1-206ENST00000595101 ADPRMQ3LIE5 342 aa14.52□□□□□ -0.09
USE1-206ENST00000595101 PAGE2BQ5JRK9 111 aa14.52□□□□□ -0.09
USE1-206ENST00000595101 COLEC12Q5KU26 742 aa14.52□□□□□ -0.09
USE1-206ENST00000595101 DCAF10Q5QP82 559 aa14.52□□□□□ -0.09
USE1-206ENST00000595101 HIST2H2AA3Q6FI13 130 aa14.52□□□□□ -0.09
USE1-206ENST00000595101 LANCL3Q6ZV70 420 aa14.52□□□□□ -0.09
USE1-206ENST00000595101 L3MBTL4Q8NA19 623 aa14.52□□□□□ -0.09
USE1-206ENST00000595101 TTLQ8NG68 377 aa14.52□□□□□ -0.09
USE1-206ENST00000595101 HUS1BQ8NHY5 278 aa14.52□□□□□ -0.09
USE1-206ENST00000595101 ZNF483Q8TF39 744 aaPredicted RBP14.52□□□□□ -0.09
USE1-206ENST00000595101 ATP6V1E2Q96A05 226 aa14.52□□□□□ -0.09
USE1-206ENST00000595101 SORBS1Q9BX66 1292 aaKnown RBP14.52□□□□□ -0.09
USE1-206ENST00000595101 PITHD1Q9GZP4 211 aaPredicted RBP14.52□□□□□ -0.09
USE1-206ENST00000595101 OR51B5Q9H339 312 aa14.52□□□□□ -0.09
USE1-206ENST00000595101 FBXL4Q9UKA2 621 aa14.52□□□□□ -0.09
USE1-206ENST00000595101 IGHV3-20A0A0C4DH32 117 aa14.51□□□□□ -0.09
USE1-206ENST00000595101 AGPSO00116 658 aa14.51□□□□□ -0.09
USE1-206ENST00000595101 PRPF4O43172 522 aaKnown RBP eCLIP14.51□□□□□ -0.09
USE1-206ENST00000595101 HEXBP07686 556 aa14.51□□□□□ -0.09
USE1-206ENST00000595101 ARL1P40616 181 aaPredicted RBP14.51□□□□□ -0.09
USE1-206ENST00000595101 STXBP1P61764 594 aaKnown RBP14.51□□□□□ -0.09
USE1-206ENST00000595101 RBBP7Q16576 425 aa14.51□□□□□ -0.09
USE1-206ENST00000595101 MINDY4Q4G0A6 757 aa14.51□□□□□ -0.09
USE1-206ENST00000595101 ZNF678Q5SXM1 525 aa14.51□□□□□ -0.09
USE1-206ENST00000595101 MFSD4BQ5TF39 518 aa14.51□□□□□ -0.09
USE1-206ENST00000595101 LIPJQ5W064 366 aa14.51□□□□□ -0.09
USE1-206ENST00000595101 ABHD17CQ6PCB6 329 aa14.51□□□□□ -0.09
USE1-206ENST00000595101 ZNF793Q6ZN11 406 aa14.51□□□□□ -0.09
USE1-206ENST00000595101 TRABD2AQ86V40 505 aa14.51□□□□□ -0.09
USE1-206ENST00000595101 OR11G2Q8NGC1 345 aa14.51□□□□□ -0.09
USE1-206ENST00000595101 TRPC4APQ8TEL6 797 aa14.51□□□□□ -0.09
USE1-206ENST00000595101 QRFPRQ96P65 431 aa14.51□□□□□ -0.09
USE1-206ENST00000595101 MS4A8Q9BY19 250 aa14.51□□□□□ -0.09
USE1-206ENST00000595101 LANCL2Q9NS86 450 aa14.51□□□□□ -0.09
USE1-206ENST00000595101 SEMA3GQ9NS98 782 aa14.51□□□□□ -0.09
USE1-206ENST00000595101 LGALS13Q9UHV8 139 aa14.51□□□□□ -0.09
USE1-206ENST00000595101 TLN1Q9Y490 2541 aaKnown RBP14.51□□□□□ -0.09
USE1-206ENST00000595101 MAGEB17A8MXT2 336 aa14.5□□□□□ -0.09
USE1-206ENST00000595101 PLIN3O60664 434 aa14.5□□□□□ -0.09
USE1-206ENST00000595101 GLRA3O75311 464 aa14.5□□□□□ -0.09
USE1-206ENST00000595101 SUPT7LO94864 414 aa14.5□□□□□ -0.09
USE1-206ENST00000595101 ETHE1O95571 254 aa14.5□□□□□ -0.09
USE1-206ENST00000595101 TAC1P20366 129 aa14.5□□□□□ -0.09
USE1-206ENST00000595101 ATP5F1P24539 256 aaPredicted RBP14.5□□□□□ -0.09
USE1-206ENST00000595101 CERS1P27544 350 aa14.5□□□□□ -0.09
USE1-206ENST00000595101 CRHR1P34998 444 aa14.5□□□□□ -0.09
USE1-206ENST00000595101 CCNG1P51959 295 aa14.5□□□□□ -0.09
USE1-206ENST00000595101 PRKAA2P54646 552 aa14.5□□□□□ -0.09
USE1-206ENST00000595101 HERVK_113P63132 956 aa14.5□□□□□ -0.09
USE1-206ENST00000595101 ZNF844Q08AG5 666 aa14.5□□□□□ -0.09
USE1-206ENST00000595101 Q0VFX4 171 aa14.5□□□□□ -0.09
USE1-206ENST00000595101 ZRSR2Q15696 482 aaKnown RBP14.5□□□□□ -0.09
USE1-206ENST00000595101 LETMD1Q6P1Q0 360 aa14.5□□□□□ -0.09
USE1-206ENST00000595101 METTL2BQ6P1Q9 378 aaKnown RBP14.5□□□□□ -0.09
USE1-206ENST00000595101 LCA5Q86VQ0 697 aa14.5□□□□□ -0.09
USE1-206ENST00000595101 SRRM1Q8IYB3 904 aaKnown RBP14.5□□□□□ -0.09
USE1-206ENST00000595101 TMEM102Q8N9M5 508 aaPredicted RBP14.5□□□□□ -0.09
USE1-206ENST00000595101 FDCSPQ8NFU4 85 aa14.5□□□□□ -0.09
USE1-206ENST00000595101 OR2L5Q8NG80 312 aa14.5□□□□□ -0.09
USE1-206ENST00000595101 OR4F6Q8NGB9 312 aa14.5□□□□□ -0.09
USE1-206ENST00000595101 WDR20Q8TBZ3 569 aa14.5□□□□□ -0.09
USE1-206ENST00000595101 GAL3ST3Q96A11 431 aa14.5□□□□□ -0.09
USE1-206ENST00000595101 NTMT1Q9BV86 223 aa14.5□□□□□ -0.09
USE1-206ENST00000595101 C1QTNF3Q9BXJ4 246 aa14.5□□□□□ -0.09
USE1-206ENST00000595101 ERVK-6Q9BXR3 956 aa14.5□□□□□ -0.09
USE1-206ENST00000595101 PRM3Q9NNZ6 103 aa14.5□□□□□ -0.09
USE1-206ENST00000595101 PRDM7Q9NQW5 492 aa14.5□□□□□ -0.09
USE1-206ENST00000595101 C14orf105Q9NVL8 296 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms