RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 OVCH1Q7RTY7 1134 aa18.18■□□□□ 0.5
DDX39A-204ENST00000586558 VASH2Q86V25 355 aa18.18■□□□□ 0.5
DDX39A-204ENST00000586558 METTL27Q8N6F8 245 aaPredicted RBP18.18■□□□□ 0.5
DDX39A-204ENST00000586558 COL26A1Q96A83 441 aa18.18■□□□□ 0.5
DDX39A-204ENST00000586558 SMIM10Q96HG1 83 aa18.18■□□□□ 0.5
DDX39A-204ENST00000586558 FAR2Q96K12 515 aa18.18■□□□□ 0.5
DDX39A-204ENST00000586558 CNTNAP3BQ96NU0 1288 aa18.18■□□□□ 0.5
DDX39A-204ENST00000586558 KCNC2Q96PR1 638 aa18.18■□□□□ 0.5
DDX39A-204ENST00000586558 CNTNAP3Q9BZ76 1288 aa18.18■□□□□ 0.5
DDX39A-204ENST00000586558 ROGDIQ9GZN7 287 aa18.18■□□□□ 0.5
DDX39A-204ENST00000586558 KLHL31Q9H511 634 aa18.18■□□□□ 0.5
DDX39A-204ENST00000586558 WDR54Q9H977 334 aa18.18■□□□□ 0.5
DDX39A-204ENST00000586558 SLC22A11Q9NSA0 550 aa18.18■□□□□ 0.5
DDX39A-204ENST00000586558 NXT1Q9UKK6 140 aaKnown RBP18.18■□□□□ 0.5
DDX39A-204ENST00000586558 PADI2Q9Y2J8 665 aa18.18■□□□□ 0.5
DDX39A-204ENST00000586558 NAALAD2Q9Y3Q0 740 aa18.18■□□□□ 0.5
DDX39A-204ENST00000586558 MAP4K5Q9Y4K4 846 aa18.18■□□□□ 0.5
DDX39A-204ENST00000586558 MAGEB17A8MXT2 336 aa18.17■□□□□ 0.5
DDX39A-204ENST00000586558 MANBAO00462 879 aa18.17■□□□□ 0.5
DDX39A-204ENST00000586558 CRCPO75575 148 aa18.17■□□□□ 0.5
DDX39A-204ENST00000586558 SNUPNO95149 360 aaKnown RBP18.17■□□□□ 0.5
DDX39A-204ENST00000586558 LIFP15018 202 aa18.17■□□□□ 0.5
DDX39A-204ENST00000586558 WDR4P57081 412 aaKnown RBP18.17■□□□□ 0.5
DDX39A-204ENST00000586558 RAB8AP61006 207 aa18.17■□□□□ 0.5
DDX39A-204ENST00000586558 TLE3Q04726 772 aa18.17■□□□□ 0.5
DDX39A-204ENST00000586558 CUL3Q13618 768 aa18.17■□□□□ 0.5
DDX39A-204ENST00000586558 DEPDC1Q5TB30 811 aa18.17■□□□□ 0.5
DDX39A-204ENST00000586558 MRPL14Q6P1L8 145 aaKnown RBP18.17■□□□□ 0.5
DDX39A-204ENST00000586558 ABHD17CQ6PCB6 329 aa18.17■□□□□ 0.5
DDX39A-204ENST00000586558 ZCCHC23Q6ZST2 131 aa18.17■□□□□ 0.5
DDX39A-204ENST00000586558 COX15Q7KZN9 410 aa18.17■□□□□ 0.5
DDX39A-204ENST00000586558 PDSS2Q86YH6 399 aa18.17■□□□□ 0.5
DDX39A-204ENST00000586558 DTWD1Q8N5C7 304 aa18.17■□□□□ 0.5
DDX39A-204ENST00000586558 AMER3Q8N944 861 aa18.17■□□□□ 0.5
DDX39A-204ENST00000586558 SLC45A3Q96JT2 553 aa18.17■□□□□ 0.5
DDX39A-204ENST00000586558 F2RL3Q96RI0 385 aa18.17■□□□□ 0.5
DDX39A-204ENST00000586558 SERPINI1Q99574 410 aa18.17■□□□□ 0.5
DDX39A-204ENST00000586558 PAIP2Q9BPZ3 127 aaKnown RBP18.17■□□□□ 0.5
DDX39A-204ENST00000586558 TBCDQ9BTW9 1192 aa18.17■□□□□ 0.5
DDX39A-204ENST00000586558 AICDAQ9GZX7 198 aa18.17■□□□□ 0.5
DDX39A-204ENST00000586558 BRF2Q9HAW0 419 aa18.17■□□□□ 0.5
DDX39A-204ENST00000586558 MKKSQ9NPJ1 570 aaPredicted RBP18.17■□□□□ 0.5
DDX39A-204ENST00000586558 WDR70Q9NW82 654 aa18.17■□□□□ 0.5
DDX39A-204ENST00000586558 FARSAQ9Y285 508 aaKnown RBP18.17■□□□□ 0.5
DDX39A-204ENST00000586558 MAU2Q9Y6X3 613 aa18.17■□□□□ 0.5
DDX39A-204ENST00000586558 ASPMQ8IZT6 3477 aa18.17■□□□□ 0.5
DDX39A-204ENST00000586558 WDFY3Q8IZQ1 3526 aa18.17■□□□□ 0.5
DDX39A-204ENST00000586558 IGLV3-12A0A075B6K2 115 aa18.16■□□□□ 0.5
DDX39A-204ENST00000586558 TMEM114B3SHH9 223 aa18.16■□□□□ 0.5
DDX39A-204ENST00000586558 ULK1O75385 1050 aa18.16■□□□□ 0.5
DDX39A-204ENST00000586558 SEMA3DO95025 777 aa18.16■□□□□ 0.5
DDX39A-204ENST00000586558 TGFB1P01137 390 aa18.16■□□□□ 0.5
DDX39A-204ENST00000586558 NEFHP12036 1026 aa18.16■□□□□ 0.5
DDX39A-204ENST00000586558 HSD3B1P14060 373 aa18.16■□□□□ 0.5
DDX39A-204ENST00000586558 HSD3B2P26439 372 aa18.16■□□□□ 0.5
DDX39A-204ENST00000586558 PTPN4P29074 926 aa18.16■□□□□ 0.5
DDX39A-204ENST00000586558 TSFMP43897 325 aaKnown RBP18.16■□□□□ 0.5
DDX39A-204ENST00000586558 CCR10P46092 362 aa18.16■□□□□ 0.5
DDX39A-204ENST00000586558 NEK2P51955 445 aa18.16■□□□□ 0.5
DDX39A-204ENST00000586558 RPS13P62277 151 aaKnown RBP18.16■□□□□ 0.5
DDX39A-204ENST00000586558 SNRPNP63162 240 aaKnown RBP18.16■□□□□ 0.5
DDX39A-204ENST00000586558 SLC9A5Q14940 896 aa18.16■□□□□ 0.5
DDX39A-204ENST00000586558 CHI3L2Q15782 390 aa18.16■□□□□ 0.5
DDX39A-204ENST00000586558 ARL13AQ5H913 290 aaPredicted RBP18.16■□□□□ 0.5
DDX39A-204ENST00000586558 MLIPQ5VWP3 458 aa18.16■□□□□ 0.5
DDX39A-204ENST00000586558 PRSS41Q7RTY9 318 aa18.16■□□□□ 0.5
DDX39A-204ENST00000586558 CUZD1Q86UP6 607 aa18.16■□□□□ 0.5
DDX39A-204ENST00000586558 ENDOVQ8N8Q3 282 aaKnown RBP18.16■□□□□ 0.5
DDX39A-204ENST00000586558 GBP7Q8N8V2 638 aaPredicted RBP18.16■□□□□ 0.5
DDX39A-204ENST00000586558 RAB3IL1Q8TBN0 382 aa18.16■□□□□ 0.5
DDX39A-204ENST00000586558 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.16■□□□□ 0.5
DDX39A-204ENST00000586558 SELENOMQ8WWX9 145 aa18.16■□□□□ 0.5
DDX39A-204ENST00000586558 OR51B5Q9H339 312 aa18.16■□□□□ 0.5
DDX39A-204ENST00000586558 MLXIPLQ9NP71 852 aa18.16■□□□□ 0.5
DDX39A-204ENST00000586558 C14orf105Q9NVL8 296 aa18.16■□□□□ 0.5
DDX39A-204ENST00000586558 NMRK1Q9NWW6 199 aa18.16■□□□□ 0.5
DDX39A-204ENST00000586558 TRPC4Q9UBN4 977 aa18.16■□□□□ 0.5
DDX39A-204ENST00000586558 ZNF282Q9UDV7 671 aaPredicted RBP18.16■□□□□ 0.5
DDX39A-204ENST00000586558 ZMIZ1Q9ULJ6 1067 aa18.16■□□□□ 0.5
DDX39A-204ENST00000586558 WDR91A4D1P6 747 aa18.15■□□□□ 0.5
DDX39A-204ENST00000586558 C4orf51C9J302 202 aa18.15■□□□□ 0.5
DDX39A-204ENST00000586558 SGK494L7N484 410 aa18.15■□□□□ 0.5
DDX39A-204ENST00000586558 DYNC1I1O14576 645 aa18.15■□□□□ 0.5
DDX39A-204ENST00000586558 RDH16O75452 317 aa18.15■□□□□ 0.5
DDX39A-204ENST00000586558 RECKO95980 971 aa18.15■□□□□ 0.5
DDX39A-204ENST00000586558 UROSP10746 265 aa18.15■□□□□ 0.5
DDX39A-204ENST00000586558 IL10P22301 178 aa18.15■□□□□ 0.5
DDX39A-204ENST00000586558 F8A1P23610 371 aa18.15■□□□□ 0.5
DDX39A-204ENST00000586558 RAP1GDS1P52306 607 aa18.15■□□□□ 0.5
DDX39A-204ENST00000586558 PLA2G16P53816 162 aa18.15■□□□□ 0.5
DDX39A-204ENST00000586558 MC1RQ01726 317 aa18.15■□□□□ 0.5
DDX39A-204ENST00000586558 OCA2Q04671 838 aa18.15■□□□□ 0.5
DDX39A-204ENST00000586558 CSTF3Q12996 717 aaKnown RBP18.15■□□□□ 0.5
DDX39A-204ENST00000586558 COL9A2Q14055 689 aaPredicted RBP18.15■□□□□ 0.5
DDX39A-204ENST00000586558 HSP90B2PQ58FF3 399 aa18.15■□□□□ 0.5
DDX39A-204ENST00000586558 TRIM42Q8IWZ5 723 aa18.15■□□□□ 0.5
DDX39A-204ENST00000586558 MGARPQ8TDB4 240 aa18.15■□□□□ 0.5
DDX39A-204ENST00000586558 RGMAQ96B86 450 aa18.15■□□□□ 0.5
DDX39A-204ENST00000586558 QRFPRQ96P65 431 aa18.15■□□□□ 0.5
DDX39A-204ENST00000586558 SERINC2Q96SA4 455 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms