RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 WFS1O76024 890 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 RPS3P23396 243 aaKnown RBP eCLIP9.85□□□□□ -0.83
RFFL-212ENST00000584655 GPAT3Q53EU6 434 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 CCNJQ5T5M9 372 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 LMX1AQ8TE12 382 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 ATL1Q8WXF7 558 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 SLC6A18Q96N87 628 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 BRINP2Q9C0B6 783 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 SLC6A16Q9GZN6 736 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 MARCH7Q9H992 704 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 SMOXQ9NWM0 555 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 HRASLS2Q9NWW9 162 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 CEP295Q9C0D2 2601 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 LAMA5O15230 3695 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 A0A1W2PRB8 838 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 SMIM30A4D0T7 59 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 JRKO75564 520 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 PFKLP17858 780 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 GRK3P35626 688 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 ALDH6A1Q02252 535 aaKnown RBP9.84□□□□□ -0.83
RFFL-212ENST00000584655 MLF2Q15773 248 aaPredicted RBP9.84□□□□□ -0.83
RFFL-212ENST00000584655 MEP1AQ16819 746 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 RBM44Q6ZP01 1051 aaKnown RBP9.84□□□□□ -0.83
RFFL-212ENST00000584655 SLCO4C1Q6ZQN7 724 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 MSRB3Q8IXL7 192 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 ANKRD53Q8N9V6 530 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 TP53INP1Q96A56 240 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 MUS81Q96NY9 551 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 KCNC2Q96PR1 638 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 NUSAP1Q9BXS6 441 aaKnown RBP9.84□□□□□ -0.83
RFFL-212ENST00000584655 TRIM15Q9C019 465 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 SMOC1Q9H4F8 434 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 PDP1Q9P0J1 537 aaPredicted RBP9.84□□□□□ -0.83
RFFL-212ENST00000584655 ARID1AO14497 2285 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 HNRNPCP07910 306 aaKnown RBP eCLIP9.84□□□□□ -0.834e-6■□□□□ 11.1
RFFL-212ENST00000584655 PGDP52209 483 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 VSX2P58304 361 aaPredicted RBP9.84□□□□□ -0.83
RFFL-212ENST00000584655 RPS21P63220 83 aaKnown RBP9.84□□□□□ -0.83
RFFL-212ENST00000584655 MAT1AQ00266 395 aaKnown RBP9.84□□□□□ -0.83
RFFL-212ENST00000584655 SMN1Q16637 294 aaKnown RBP9.84□□□□□ -0.83
RFFL-212ENST00000584655 SLC5A12Q1EHB4 618 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 RBM45Q8IUH3 476 aaKnown RBP9.84□□□□□ -0.83
RFFL-212ENST00000584655 ZDHHC21Q8IVQ6 265 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 CNIH3Q8TBE1 160 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 NCSTNQ92542 709 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 NACC2Q96BF6 587 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 HOPXQ9BPY8 73 aaPredicted RBP9.84□□□□□ -0.83
RFFL-212ENST00000584655 ZCCHC3Q9NUD5 404 aaKnown RBP9.84□□□□□ -0.83
RFFL-212ENST00000584655 RLIMQ9NVW2 624 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 RIMS3Q9UJD0 308 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 LRRC42Q9Y546 428 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 HAT1O14929 419 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 SLC28A2O43868 658 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 NDUFS2O75306 463 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 SLCO2B1O94956 709 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 THEGLP0DJG4 465 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 CCNA2P20248 432 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 AP1S2P56377 157 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 ABHD18Q0P651 414 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 KCNAB1Q14722 419 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 NXPE4Q6UWF7 544 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 TMEM107Q6UX40 140 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 MTSS1LQ765P7 747 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 ADGRG5Q8IZF4 528 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 HM13Q8TCT9 377 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 CAMK1GQ96NX5 476 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 LYSMD1Q96S90 227 aa9.84□□□□□ -0.83
RFFL-212ENST00000584655 HEATR5BQ9P2D3 2071 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 A0A1W2PQF6 199 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 GRXCR2A6NFK2 248 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 CLDN24A6NM45 220 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 H3BSA7 217 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 GFYI3L273 518 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 VPS4BO75351 444 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 SEMA4FO95754 770 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 AGXTP21549 392 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 NCBP2P52298 156 aaKnown RBP eCLIP9.83□□□□□ -0.84
RFFL-212ENST00000584655 LSM11P83369 360 aaKnown RBP eCLIP9.83□□□□□ -0.84
RFFL-212ENST00000584655 ROR2Q01974 943 aaKnown RBP9.83□□□□□ -0.84
RFFL-212ENST00000584655 RPL6Q02878 288 aaKnown RBP9.83□□□□□ -0.84
RFFL-212ENST00000584655 EIF4HQ15056 248 aaKnown RBP9.83□□□□□ -0.84
RFFL-212ENST00000584655 SYT16Q17RD7 645 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 MINDY4Q4G0A6 757 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 FAM69BQ5VUD6 431 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 LRRC70Q7Z2Q7 622 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 UBE2Q1Q7Z7E8 422 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 C16orf58Q96GQ5 468 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 Q9H521 79 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 SOX1O00570 391 aaPredicted RBP9.83□□□□□ -0.84
RFFL-212ENST00000584655 CEACAM5P06731 702 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 HOXA9P31269 272 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 ILF3Q12906 894 aaKnown RBP eCLIP9.83□□□□□ -0.847e-7■■□□□ 13.2
RFFL-212ENST00000584655 PRSS53Q2L4Q9 553 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 TOR1AIP1Q5JTV8 583 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 CEACAM20Q6UY09 585 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 DHRSXQ8N5I4 330 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 GATSQ8NAP1 163 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 THAP3Q8WTV1 239 aaPredicted RBP9.83□□□□□ -0.84
RFFL-212ENST00000584655 SPACA7Q96KW9 195 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 AIF1LQ9BQI0 150 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms