RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 ANKRD37Q7Z713 158 aa19.25■□□□□ 0.67
SS18-224ENST00000584083 CENPLQ8N0S6 344 aaPredicted RBP19.25■□□□□ 0.67
SS18-224ENST00000584083 CISD2Q8N5K1 135 aaKnown RBP19.25■□□□□ 0.67
SS18-224ENST00000584083 PPP4R1Q8TF05 950 aa19.25■□□□□ 0.67
SS18-224ENST00000584083 PTCD3Q96EY7 689 aaKnown RBP19.25■□□□□ 0.67
SS18-224ENST00000584083 SMIM10Q96HG1 83 aa19.25■□□□□ 0.67
SS18-224ENST00000584083 FAR2Q96K12 515 aa19.25■□□□□ 0.67
SS18-224ENST00000584083 CNDP1Q96KN2 507 aa19.25■□□□□ 0.67
SS18-224ENST00000584083 IMMP1LQ96LU5 166 aa19.25■□□□□ 0.67
SS18-224ENST00000584083 VPS11Q9H270 941 aa19.25■□□□□ 0.67
SS18-224ENST00000584083 RHBGQ9H310 441 aa19.25■□□□□ 0.67
SS18-224ENST00000584083 LANCL2Q9NS86 450 aa19.25■□□□□ 0.67
SS18-224ENST00000584083 PSMD12O00232 456 aaPredicted RBP19.24■□□□□ 0.67
SS18-224ENST00000584083 PRAMEF4O60810 478 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 ITGAMP11215 1152 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 JAK1P23458 1154 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 GSTM2P28161 218 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 ECHS1P30084 290 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 BTN3A2P78410 334 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 RHAGQ02094 409 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 CHIT1Q13231 466 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 LAPTM5Q13571 262 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 HIST2H2ACQ16777 129 aaPredicted RBP19.24■□□□□ 0.67
SS18-224ENST00000584083 PAGE2BQ5JRK9 111 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 PRAMEF9Q5VWM5 478 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 HIST2H2AA3Q6FI13 130 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 KLC3Q6P597 504 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 TAOK1Q7L7X3 1001 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 CUZD1Q86UP6 607 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 IFT20Q8IY31 132 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 GALNT11Q8NCW6 608 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 PLPP5Q8NEB5 264 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 UHMK1Q8TAS1 419 aaKnown RBP19.24■□□□□ 0.67
SS18-224ENST00000584083 SLC44A1Q8WWI5 657 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 PSMF1Q92530 271 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 GAL3ST3Q96A11 431 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 SEC16BQ96JE7 1060 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 EFCAB11Q9BUY7 163 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 FUT8Q9BYC5 575 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 CLK4Q9HAZ1 481 aaKnown RBP19.24■□□□□ 0.67
SS18-224ENST00000584083 OPTCQ9UBM4 332 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 ASB1Q9Y576 335 aa19.24■□□□□ 0.67
SS18-224ENST00000584083 A0A0G2JN53 185 aa19.23■□□□□ 0.67
SS18-224ENST00000584083 LRIT2A6NDA9 550 aa19.23■□□□□ 0.67
SS18-224ENST00000584083 MAGEB17A8MXT2 336 aa19.23■□□□□ 0.67
SS18-224ENST00000584083 POC1B-GALNT4F8VUJ3 575 aa19.23■□□□□ 0.67
SS18-224ENST00000584083 ERI3O43414 337 aaKnown RBP19.23■□□□□ 0.67
SS18-224ENST00000584083 CLEC3AO75596 197 aa19.23■□□□□ 0.67
SS18-224ENST00000584083 KLHL2O95198 593 aa19.23■□□□□ 0.67
SS18-224ENST00000584083 ALDOAP04075 364 aaKnown RBP19.23■□□□□ 0.67
SS18-224ENST00000584083 RNH1P13489 461 aaKnown RBP19.23■□□□□ 0.67
SS18-224ENST00000584083 BTBD16Q32M84 506 aa19.23■□□□□ 0.67
SS18-224ENST00000584083 SFT2D3Q587I9 215 aa19.23■□□□□ 0.67
SS18-224ENST00000584083 AMER2Q8N7J2 671 aa19.23■□□□□ 0.67
SS18-224ENST00000584083 RHEBL1Q8TAI7 183 aa19.23■□□□□ 0.67
SS18-224ENST00000584083 TSLPQ969D9 159 aa19.23■□□□□ 0.67
SS18-224ENST00000584083 SNRNP40Q96DI7 357 aaKnown RBP19.23■□□□□ 0.67
SS18-224ENST00000584083 C19orf60Q96EN9 201 aa19.23■□□□□ 0.67
SS18-224ENST00000584083 WDR34Q96EX3 536 aa19.23■□□□□ 0.67
SS18-224ENST00000584083 MAGEB10Q96LZ2 347 aaPredicted RBP19.23■□□□□ 0.67
SS18-224ENST00000584083 SLC29A3Q9BZD2 475 aa19.23■□□□□ 0.67
SS18-224ENST00000584083 AICDAQ9GZX7 198 aa19.23■□□□□ 0.67
SS18-224ENST00000584083 COPG2Q9UBF2 871 aa19.23■□□□□ 0.67
SS18-224ENST00000584083 ZNF490Q9ULM2 529 aaPredicted RBP19.23■□□□□ 0.67
SS18-224ENST00000584083 NFU1Q9UMS0 254 aa19.23■□□□□ 0.67
SS18-224ENST00000584083 COPG1Q9Y678 874 aaKnown RBP19.23■□□□□ 0.67
SS18-224ENST00000584083 ESPL1Q14674 2120 aa19.22■□□□□ 0.67
SS18-224ENST00000584083 CPAMD8Q8IZJ3 1885 aa19.22■□□□□ 0.67
SS18-224ENST00000584083 A0A087WUV0 522 aaPredicted RBP19.22■□□□□ 0.67
SS18-224ENST00000584083 DYTNA2CJ06 578 aa19.22■□□□□ 0.67
SS18-224ENST00000584083 C4orf51C9J302 202 aa19.22■□□□□ 0.67
SS18-224ENST00000584083 K7EPI3 171 aa19.22■□□□□ 0.67
SS18-224ENST00000584083 GFAPP14136 432 aa19.22■□□□□ 0.67
SS18-224ENST00000584083 EPORP19235 508 aa19.22■□□□□ 0.67
SS18-224ENST00000584083 GNLYP22749 145 aa19.22■□□□□ 0.67
SS18-224ENST00000584083 HNRNPH1P31943 449 aaKnown RBP19.22■□□□□ 0.67
SS18-224ENST00000584083 HPDP32754 393 aaPredicted RBP19.22■□□□□ 0.67
SS18-224ENST00000584083 MSH2P43246 934 aa19.22■□□□□ 0.67
SS18-224ENST00000584083 SERPINB9P50453 376 aa19.22■□□□□ 0.67
SS18-224ENST00000584083 OR4D2P58180 307 aa19.22■□□□□ 0.67
SS18-224ENST00000584083 ARG2P78540 354 aa19.22■□□□□ 0.67
SS18-224ENST00000584083 ZNF169Q14929 603 aaPredicted RBP19.22■□□□□ 0.67
SS18-224ENST00000584083 ACAP2Q15057 778 aa19.22■□□□□ 0.67
SS18-224ENST00000584083 TLR1Q15399 786 aa19.22■□□□□ 0.67
SS18-224ENST00000584083 B3GNTL1Q67FW5 361 aaPredicted RBP19.22■□□□□ 0.67
SS18-224ENST00000584083 PLAG1Q6DJT9 500 aa19.22■□□□□ 0.67
SS18-224ENST00000584083 UBTD2Q8WUN7 234 aa19.22■□□□□ 0.67
SS18-224ENST00000584083 MS4A6EQ96DS6 147 aa19.22■□□□□ 0.67
SS18-224ENST00000584083 PTCHD1Q96NR3 888 aa19.22■□□□□ 0.67
SS18-224ENST00000584083 PAFAH2Q99487 392 aa19.22■□□□□ 0.67
SS18-224ENST00000584083 ASF1BQ9NVP2 202 aa19.22■□□□□ 0.67
SS18-224ENST00000584083 ANGPTL3Q9Y5C1 460 aa19.22■□□□□ 0.67
SS18-224ENST00000584083 PCDHGA10Q9Y5H3 936 aa19.22■□□□□ 0.67
SS18-224ENST00000584083 A0A088AWK7 358 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 CCDC189A1A4V9 331 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 A8MUI8 341 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 FAM227AF5H4B4 570 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 PRMT3O60678 531 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 RHOXF2BP0C7M4 288 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 MTHFD2P13995 350 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms