RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	BROX	Q5VW32	411 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	CXorf57	Q6NSI4	855 aa	Known RBP	11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	ZNF773	Q6PK81	442 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	GPR155	Q7Z3F1	870 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	THAP5	Q7Z6K1	395 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	CROCCP3	Q8IVE0	287 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	PM20D2	Q8IYS1	436 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	C8orf59	Q8N0T1	100 aa	Predicted RBP	11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	ELMOD1	Q8N336	334 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	ABHD11	Q8NFV4	315 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	OR2T12	Q8NG77	320 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	OR56A4	Q8NGH8	313 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	NDNF	Q8TB73	568 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	ZFP90	Q8TF47	636 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	TCEAL4	Q96EI5	215 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	ZNF583	Q96ND8	569 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	FAM118A	Q9NWS6	357 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	CLEC4E	Q9ULY5	219 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	GAB2	Q9UQC2	676 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	DBX1	A6NMT0	343 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	ANKRD66	B4E2M5	251 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	SLC9A3R1	O14745	358 aa	Predicted RBP	11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	STX7	O15400	261 aa	Known RBP	11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	DEAF1	O75398	565 aa	Predicted RBP	11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	GLUD1	P00367	558 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	ANXA6	P08133	673 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	INHBB	P09529	407 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	TIMP2	P16035	220 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	OGN	P20774	298 aa	Known RBP	11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	EPHA2	P29317	976 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	PCYT1A	P49585	367 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	EIF2B2	P49770	351 aa	Known RBP	11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	BCAP31	P51572	246 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	ALDH3A2	P51648	485 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	IL2	P60568	153 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	EMX2	Q04743	252 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	OCLN	Q16625	522 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	TRIM16L	Q309B1	348 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	FAM98B	Q52LJ0	330 aa	Known RBP	11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	PAGE2B	Q5JRK9	111 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	PXDC1	Q5TGL8	231 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	AFTPH	Q6ULP2	937 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	NLRP8	Q86W28	1048 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	PNPT1	Q8TCS8	783 aa	Known RBP	11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	GATAD2B	Q8WXI9	593 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	ING5	Q8WYH8	240 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	ELMO1	Q92556	727 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	RPL3L	Q92901	407 aa	Known RBP	11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	AHCYL2	Q96HN2	611 aa	Known RBP	11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	RAD9A	Q99638	391 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	TINAGL1	Q9GZM7	467 aa	Predicted RBP	11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	ZBP1	Q9H171	429 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	IPPK	Q9H8X2	491 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	SYTL2	Q9HCH5	934 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	AMBN	Q9NP70	447 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	ELOVL2	Q9NXB9	296 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	CCL26	Q9Y258	94 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	SLC22A14	Q9Y267	594 aa		11.19	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063		B4E171	279 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	ZNF682	O95780	498 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	CLU	P10909	449 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	P2RX3	P56373	397 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	OCA2	Q04671	838 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	SF1	Q15637	639 aa	Known RBP	11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	AASDH	Q4L235	1098 aa	Predicted RBP	11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	RFLNA	Q6ZTI6	216 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	GOLGA7	Q7Z5G4	137 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	ZFAND4	Q86XD8	727 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	BBS7	Q8IWZ6	715 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	RIMKLA	Q8IXN7	391 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	RHEBL1	Q8TAI7	183 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	BPIFB1	Q8TDL5	484 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	MYLIP	Q8WY64	445 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	MBOAT4	Q96T53	435 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	NEURL2	Q9BR09	285 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	KLF16	Q9BXK1	252 aa	Predicted RBP	11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	RIBC2	Q9H4K1	309 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	ACTR8	Q9H981	624 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	CD320	Q9NPF0	282 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	ERVK-18	Q9QC07	812 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	MYOF	Q9NZM1	2061 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	FAM234B	A2RU67	622 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	KDELR3	O43731	214 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	SEC22B	O75396	215 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	VPS26A	O75436	327 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	CLDN11	O75508	207 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	PABPC1	P11940	636 aa	Known RBP	11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	FCGR1A	P12314	374 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	LPO	P22079	712 aa	Predicted RBP	11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	CDH4	P55283	916 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	IFITM3	Q01628	133 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	TAF1A	Q15573	450 aa	Predicted RBP	11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	CPSF6	Q16630	551 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	LAIR2	Q6ISS4	152 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	SLCO6A1	Q86UG4	719 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	CHDH	Q8NE62	594 aa	Predicted RBP	11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	TAMM41	Q96BW9	452 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	SGCZ	Q96LD1	299 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	KCNC2	Q96PR1	638 aa		11.18	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	ASAH2	Q9NR71	780 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms