RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 GCGRP47871 477 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 FOXA1P55317 472 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 BTN3A2P78410 334 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 BST1Q10588 318 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 HYAL2Q12891 473 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 TGIF1Q15583 401 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 IMPG1Q17R60 797 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 AP5B1Q2VPB7 878 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 NKAIN1Q4KMZ8 207 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 DEFB134Q4QY38 66 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 TCHHL1Q5QJ38 904 aaPredicted RBP13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 SH2D4BQ5SQS7 431 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 DEPDC1Q5TB30 811 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 KHDRBS2Q5VWX1 349 aaKnown RBP13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 CLEC6AQ6EIG7 209 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 FAM199XQ6PEV8 388 aaPredicted RBP13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 LRRC69Q6ZNQ3 347 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 DTX1Q86Y01 620 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 CLYBLQ8N0X4 340 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 AFAP1L2Q8N4X5 818 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 DTWD1Q8N5C7 304 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 OR2L5Q8NG80 312 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 OR6Y1Q8NGX8 325 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 SNIP1Q8TAD8 396 aaKnown RBP13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 RAB3IL1Q8TBN0 382 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 LRRC8CQ8TDW0 803 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 ZCCHC14Q8WYQ9 949 aaKnown RBP13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 RGMAQ96B86 450 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 TMEM121BQ9BXQ6 578 aaPredicted RBP13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 ROGDIQ9GZN7 287 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 ILKAPQ9H0C8 392 aaPredicted RBP13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 FARSBQ9NSD9 589 aaKnown RBP13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 PSD3Q9NYI0 1048 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 AHSPQ9NZD4 102 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 SLC12A4Q9UP95 1085 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 NAALAD2Q9Y3Q0 740 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 TRAF6Q9Y4K3 522 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 ZNF860A6NHJ4 632 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 H0YIG0 161 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 SGK494L7N484 410 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 SAP18O00422 153 aaKnown RBP13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 KLK10O43240 276 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 FOXS1O43638 330 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 ITM2AO43736 263 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 HSD3B1P14060 373 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 HSD3B2P26439 372 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 HTR6P50406 440 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 RPS15P62841 145 aaKnown RBP13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 OCA2Q04671 838 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 ZNF33BQ06732 778 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 ADPRMQ3LIE5 342 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 SCIMPQ6UWF3 145 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 PRSS41Q7RTY9 318 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 KIRREL3Q8IZU9 778 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 GBP7Q8N8V2 638 aaPredicted RBP13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 CT55Q8WUE5 264 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 DCBLD2Q96PD2 775 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 KCNC2Q96PR1 638 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 HBEGFQ99075 208 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 TBCDQ9BTW9 1192 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 EFHD1Q9BUP0 239 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 AKIRIN1Q9H9L7 192 aaPredicted RBP13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 GPN2Q9H9Y4 310 aaPredicted RBP13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 BRF2Q9HAW0 419 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 THAP1Q9NVV9 213 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 CROTQ9UKG9 612 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 PPT2Q9UMR5 302 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 RAP2CQ9Y3L5 183 aa13.77□□□□□ -0.21
NPLOC4-218ENST00000574964 CEP295Q9C0D2 2601 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 TMEM8BA6NDV4 472 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 B3GALT2O43825 422 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 GALR3O60755 368 aaPredicted RBP13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 RDH16O75452 317 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 TBX6O95947 436 aaPredicted RBP13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 B3GALT4O96024 378 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 FGF4P08620 206 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 CD63P08962 238 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 SMIM10L1P0DMW3 83 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 STAT5AP42229 794 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 SSR2P43308 183 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 MTTPP55157 894 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 CSTF3Q12996 717 aaKnown RBP13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 CLN3Q13286 438 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 DNASE1L3Q13609 305 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 CUL3Q13618 768 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 DSG2Q14126 1118 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 ABRAXAS2Q15018 415 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 FAM219BQ5XKK7 198 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 ZNF385CQ66K41 422 aaPredicted RBP13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 ABHD17CQ6PCB6 329 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 DDIASQ8IXT1 998 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 ARHGEF39Q8N4T4 335 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 ZNF75CPQ92670 426 aaPredicted RBP13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 SMIM10Q96HG1 83 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 DPH1Q9BZG8 443 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 AICDAQ9GZX7 198 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 ZNF395Q9H8N7 513 aaPredicted RBP13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 TNFRSF12AQ9NP84 129 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 PFDN4Q9NQP4 134 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms