RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 EFEMP2O95967 443 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 HEXBP07686 556 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 DHRS4L1P0CG22 281 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 FBLP22087 321 aaKnown RBP9.69□□□□□ -0.86
SMG6-213ENST00000573166 PRDX6P30041 224 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 RYKP34925 604 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 SLC19A1P41440 591 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 RXRGP48443 463 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 GALNT1Q10472 559 aaPredicted RBP9.69□□□□□ -0.86
SMG6-213ENST00000573166 WASHC2DQ5SRD0 308 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 CADM4Q8NFZ8 388 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 OR2L8Q8NGY9 312 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 VMP1Q96GC9 406 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 CMKLR1Q99788 373 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 PCED1AQ9H1Q7 454 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 ALG2Q9H553 416 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 REEP4Q9H6H4 257 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 FARSBQ9NSD9 589 aaKnown RBP9.69□□□□□ -0.86
SMG6-213ENST00000573166 MAGEL2Q9UJ55 1249 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 AP4S1Q9Y587 144 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 R4GN57 208 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 TRBV5-4A0A0C4DH59 114 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 SPTY2D1-AS1A0A0U1RR47 76 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 CLIC1O00299 241 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 SLC22A2O15244 555 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 UGDHO60701 494 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 ATP6V1B1P15313 513 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 ZXDAP98168 799 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 RIPK1Q13546 671 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 LRRC74BQ6ZQY2 392 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 COMMD6Q7Z4G1 85 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 MCATQ8IVS2 390 aaKnown RBP9.69□□□□□ -0.86
SMG6-213ENST00000573166 CCDC116Q8IYX3 515 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 ARL14Q8N4G2 192 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 ADCY4Q8NFM4 1077 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 SLC35A5Q9BS91 424 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 IER2Q9BTL4 223 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 TEX101Q9BY14 249 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 EBF2Q9HAK2 575 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 DNAAF2Q9NVR5 837 aaKnown RBP9.69□□□□□ -0.86
SMG6-213ENST00000573166 WARS2Q9UGM6 360 aaKnown RBP9.69□□□□□ -0.86
SMG6-213ENST00000573166 MAU2Q9Y6X3 613 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 MYOCOSA0A1B0GUC4 107 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 YY2O15391 372 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 GSC2O15499 205 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 WFS1O76024 890 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 XKP51811 444 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 OLR1P78380 273 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 SRSF5Q13243 272 aaKnown RBP9.69□□□□□ -0.86
SMG6-213ENST00000573166 ZNF267Q14586 743 aaPredicted RBP9.69□□□□□ -0.86
SMG6-213ENST00000573166 LARS2Q15031 903 aaKnown RBP9.69□□□□□ -0.86
SMG6-213ENST00000573166 C14orf28Q4W4Y0 310 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 SLC2A7Q6PXP3 512 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 DEF8Q6ZN54 512 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 ZDHHC13Q8IUH4 622 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 PMEPA1Q969W9 287 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 CADM1Q9BY67 442 aaKnown RBP9.69□□□□□ -0.86
SMG6-213ENST00000573166 POLR1BQ9H9Y6 1135 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 C19orf25Q9UFG5 118 aaPredicted RBP9.69□□□□□ -0.86
SMG6-213ENST00000573166 GPR179Q6PRD1 2367 aa9.69□□□□□ -0.86
SMG6-213ENST00000573166 HMX2A2RU54 273 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 DUXAA6NLW8 204 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 TP73O15350 636 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 ZBTB11O95625 1053 aaPredicted RBP9.68□□□□□ -0.86
SMG6-213ENST00000573166 C9P02748 559 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 FAM58BPP0C7Q3 252 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 ACADSP16219 412 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 FOXA1P55317 472 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 TMEM207Q6UWW9 146 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 RINLQ6ZS11 566 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 CLEC14AQ86T13 490 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 NRROSQ86YC3 692 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 DTWD2Q8NBA8 298 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 C19orf43Q9BQ61 176 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 STARD5Q9NSY2 213 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 FAM120CQ9NX05 1096 aaKnown RBP9.68□□□□□ -0.86
SMG6-213ENST00000573166 ABI3Q9P2A4 366 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 A0A1W2PQF6 199 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 DHRS12A0PJE2 317 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 ANTXRLA6NF34 631 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 PSIP1O75475 530 aaKnown RBP9.68□□□□□ -0.86
SMG6-213ENST00000573166 RPLP0P05388 317 aaKnown RBP9.68□□□□□ -0.86
SMG6-213ENST00000573166 IL12BP29460 328 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 SIM1P81133 766 aaPredicted RBP9.68□□□□□ -0.86
SMG6-213ENST00000573166 TUBB3Q13509 450 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 OR4C11Q6IEV9 310 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 FBXW8Q8N3Y1 598 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 FAM47BQ8NA70 645 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 FAM156AQ8NDB6 213 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 VANGL1Q8TAA9 524 aaPredicted RBP9.68□□□□□ -0.86
SMG6-213ENST00000573166 ZNF483Q8TF39 744 aaPredicted RBP9.68□□□□□ -0.86
SMG6-213ENST00000573166 EID2BQ96D98 161 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 PEX11GQ96HA9 241 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 CGREF1Q99674 301 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 SLC39A3Q9BRY0 314 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 NTMT1Q9BV86 223 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 SEMA6AQ9H2E6 1030 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 A0A1W2PP18 115 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 H3BN98 237 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 HNRNPRO43390 633 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms