RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 ENTPD4Q9Y227 616 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 DTX4Q9Y2E6 619 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 GPR55Q9Y2T6 319 aaPredicted RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 PLLPQ9Y342 182 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 ADAM18Q9Y3Q7 739 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 ZFC3H1O60293 1989 aaKnown RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 TP53BP1Q12888 1972 aaPredicted RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 TICRRQ7Z2Z1 1910 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 MYO10Q9HD67 2058 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 DENND4AQ7Z401 1863 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 A0A0A6YYH2 397 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 C13orf42A0A1B0GVH6 325 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 FAM240BA0A1B0GVZ2 78 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 A0A1W2PQ72 361 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 TCRBV7S3A2A0A539 114 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 TYW5A2RUC4 315 aaKnown RBP3.42□□□□□ -1.86
SMG6-208ENST00000570874 GMNCA6NCL1 334 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 C5orf60A6NFR6 353 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 FAM90A20PA6NIJ5 464 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 A6NJ64 397 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 NPIPA2E9PIF3 369 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 FAM72CH0Y354 149 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 H0YGN5 161 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 PYCARD-AS1I3L0S3 204 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 ZNF561-AS1K7EIQ3 104 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 M0QYT0 321 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 DCLK1O15075 740 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 CHADO15335 359 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 ZNF264O43296 627 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 MSI1O43347 362 aaKnown RBP3.42□□□□□ -1.86
SMG6-208ENST00000570874 GRID2O43424 1007 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 DCXO43602 365 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 BNIP3LO60238 219 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 SUN1O94901 812 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 KRT6AP02538 564 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 SHBGP04278 402 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 CFIP05156 583 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 ANXA5P08758 320 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 GSTP1P09211 210 aaKnown RBP3.42□□□□□ -1.86
SMG6-208ENST00000570874 CCL2P13500 99 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 GOT1P17174 413 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 CTPS1P17812 591 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 ADRA2CP18825 462 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 POLR2CP19387 275 aaPredicted RBP3.42□□□□□ -1.86
SMG6-208ENST00000570874 ITIH2P19823 946 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 ATP6V1C1P21283 382 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 LCN1P31025 176 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 SDC4P31431 198 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 HNRNPH1P31943 449 aaKnown RBP3.42□□□□□ -1.86
SMG6-208ENST00000570874 PTPN7P35236 360 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 LTBRP36941 435 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 SLC26A3P40879 764 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 NAA10P41227 235 aaPredicted RBP3.42□□□□□ -1.86
SMG6-208ENST00000570874 PTPN9P43378 593 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 ALDH1A3P47895 512 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 LHX1P48742 406 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 NUMBP49757 651 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 BCAP31P51572 246 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 CCNG1P51959 295 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 LBX1P52954 281 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 ARPP19P56211 112 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 LGALS4P56470 323 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 NRG3P56975 720 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 DEFB103AP81534 67 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 MAT1AQ00266 395 aaKnown RBP3.42□□□□□ -1.86
SMG6-208ENST00000570874 BNC1Q01954 994 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 GSTM4Q03013 218 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 SLC10A2Q12908 348 aaPredicted RBP3.42□□□□□ -1.86
SMG6-208ENST00000570874 NME3Q13232 169 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 PPIGQ13427 754 aaKnown RBP eCLIP3.42□□□□□ -1.862e-7■□□□□ 9.6
SMG6-208ENST00000570874 BFSP2Q13515 415 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 KRT81Q14533 505 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 FASTKD3Q14CZ7 662 aaKnown RBP3.42□□□□□ -1.86
SMG6-208ENST00000570874 AP5B1Q2VPB7 878 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 DCAF6Q58WW2 860 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 BEX5Q5H9J7 111 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 ZNF766Q5HY98 468 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 Q5PR19 223 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 C9orf50Q5SZB4 431 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 ARTNQ5T4W7 220 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 FAM72AQ5TYM5 149 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 FAM171A1Q5VUB5 890 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 IL23RQ5VWK5 629 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 ANKRD22Q5VYY1 191 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 PLCXD3Q63HM9 321 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 FAM91A1Q658Y4 838 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 CPZQ66K79 652 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 RAP1GAP2Q684P5 730 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 KCTD16Q68DU8 428 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 SLC9A4Q6AI14 798 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 DGAT2L7PQ6IED9 249 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 FAM72DQ6L9T8 149 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 RHBDF2Q6PJF5 856 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 TSSK4Q6SA08 328 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 GLB1LQ6UWU2 654 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 ETV3LQ6ZN32 361 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 SLC26A9Q7LBE3 791 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 YRDCQ86U90 279 aaKnown RBP3.42□□□□□ -1.86
SMG6-208ENST00000570874 TAC4Q86UU9 113 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 WDR5BQ86VZ2 330 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms