RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 IL1RNP18510 177 aa22.31■■□□□ 1.16
LINC00543-201ENST00000567234 PTX3P26022 381 aaPredicted RBP22.31■■□□□ 1.16
LINC00543-201ENST00000567234 SOX11P35716 441 aa22.31■■□□□ 1.16
LINC00543-201ENST00000567234 RPL3P39023 403 aaKnown RBP22.31■■□□□ 1.16
LINC00543-201ENST00000567234 ZNF763Q0D2J5 394 aa22.31■■□□□ 1.16
LINC00543-201ENST00000567234 NR1D2Q14995 579 aa22.31■■□□□ 1.16
LINC00543-201ENST00000567234 CPTPQ5TA50 214 aa22.31■■□□□ 1.16
LINC00543-201ENST00000567234 TBC1D3GQ6DHY5 549 aa22.31■■□□□ 1.16
LINC00543-201ENST00000567234 TBC1D3CQ6IPX1 549 aa22.31■■□□□ 1.16
LINC00543-201ENST00000567234 FKBP9P1Q75LS8 142 aa22.31■■□□□ 1.16
LINC00543-201ENST00000567234 SERPINA11Q86U17 422 aa22.31■■□□□ 1.16
LINC00543-201ENST00000567234 TBC1D3Q8IZP1 549 aaPredicted RBP22.31■■□□□ 1.16
LINC00543-201ENST00000567234 METTL4Q8N3J2 472 aa22.31■■□□□ 1.16
LINC00543-201ENST00000567234 OR13F1Q8NGS4 319 aa22.31■■□□□ 1.16
LINC00543-201ENST00000567234 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.31■■□□□ 1.16
LINC00543-201ENST00000567234 FIG4Q92562 907 aa22.31■■□□□ 1.16
LINC00543-201ENST00000567234 SIPA1Q96FS4 1042 aa22.31■■□□□ 1.16
LINC00543-201ENST00000567234 SCARF2Q96GP6 870 aaPredicted RBP22.31■■□□□ 1.16
LINC00543-201ENST00000567234 ZNF347Q96SE7 839 aa22.31■■□□□ 1.16
LINC00543-201ENST00000567234 DCUN1D5Q9BTE7 237 aa22.31■■□□□ 1.16
LINC00543-201ENST00000567234 DUSP26Q9BV47 211 aa22.31■■□□□ 1.16
LINC00543-201ENST00000567234 PHF7Q9BWX1 381 aaPredicted RBP22.31■■□□□ 1.16
LINC00543-201ENST00000567234 RHBGQ9H310 441 aa22.31■■□□□ 1.16
LINC00543-201ENST00000567234 PRM3Q9NNZ6 103 aa22.31■■□□□ 1.16
LINC00543-201ENST00000567234 ATP6V1HQ9UI12 483 aa22.31■■□□□ 1.16
LINC00543-201ENST00000567234 GNG14A0A1W2PPG7 69 aa22.3■■□□□ 1.16
LINC00543-201ENST00000567234 PRR23AA6NEV1 266 aa22.3■■□□□ 1.16
LINC00543-201ENST00000567234 GABRR3A8MPY1 467 aa22.3■■□□□ 1.16
LINC00543-201ENST00000567234 CACNB4O00305 520 aaPredicted RBP22.3■■□□□ 1.16
LINC00543-201ENST00000567234 TPST1O60507 370 aa22.3■■□□□ 1.16
LINC00543-201ENST00000567234 CLPXO76031 633 aa22.3■■□□□ 1.16
LINC00543-201ENST00000567234 ACP5P13686 325 aa22.3■■□□□ 1.16
LINC00543-201ENST00000567234 SERPINB1P30740 379 aa22.3■■□□□ 1.16
LINC00543-201ENST00000567234 CDH15P55291 814 aa22.3■■□□□ 1.16
LINC00543-201ENST00000567234 TFF2Q03403 129 aa22.3■■□□□ 1.16
LINC00543-201ENST00000567234 CHRNB3Q05901 458 aa22.3■■□□□ 1.16
LINC00543-201ENST00000567234 OXA1LQ15070 435 aa22.3■■□□□ 1.16
LINC00543-201ENST00000567234 PYCR3Q53H96 274 aa22.3■■□□□ 1.16
LINC00543-201ENST00000567234 CCNYL2Q5T2Q4 361 aa22.3■■□□□ 1.16
LINC00543-201ENST00000567234 IER5LQ5T953 404 aa22.3■■□□□ 1.16
LINC00543-201ENST00000567234 COMMD6Q7Z4G1 85 aa22.3■■□□□ 1.16
LINC00543-201ENST00000567234 PHACTR4Q8IZ21 702 aa22.3■■□□□ 1.16
LINC00543-201ENST00000567234 LMNTD1Q8N9Z9 388 aa22.3■■□□□ 1.16
LINC00543-201ENST00000567234 ABHD11Q8NFV4 315 aa22.3■■□□□ 1.16
LINC00543-201ENST00000567234 DNASE1L2Q92874 299 aa22.3■■□□□ 1.16
LINC00543-201ENST00000567234 RNF145Q96MT1 663 aa22.3■■□□□ 1.16
LINC00543-201ENST00000567234 BDH2Q9BUT1 245 aa22.3■■□□□ 1.16
LINC00543-201ENST00000567234 SPNS1Q9H2V7 528 aa22.3■■□□□ 1.16
LINC00543-201ENST00000567234 NT5DC2Q9H857 520 aa22.3■■□□□ 1.16
LINC00543-201ENST00000567234 PRDM6Q9NQX0 595 aa22.3■■□□□ 1.16
LINC00543-201ENST00000567234 HEMK1Q9Y5R4 338 aaPredicted RBP22.3■■□□□ 1.16
LINC00543-201ENST00000567234 BCL10O95999 233 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 GSNP06396 782 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 LAMP1P11279 417 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 IDSP22304 550 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 RPL10P27635 214 aaKnown RBP22.29■■□□□ 1.16
LINC00543-201ENST00000567234 CAPGP40121 348 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 ZNF846Q147U1 533 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 GPR153Q6NV75 609 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 ARMCX6Q7L4S7 300 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 GPR156Q8NFN8 814 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 AURKBQ96GD4 344 aaPredicted RBP22.29■■□□□ 1.16
LINC00543-201ENST00000567234 SEPHS2Q99611 448 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 AIF1LQ9BQI0 150 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 WDR12Q9GZL7 423 aaKnown RBP22.29■■□□□ 1.16
LINC00543-201ENST00000567234 SLC6A17Q9H1V8 727 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 PSME2Q9UL46 239 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 COL6A3P12111 3177 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 DLGAP1O14490 977 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 SOCS2O14508 198 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 EPN2O95208 641 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 GPX2P18283 190 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 PMS2P3Q13401 168 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 SF1Q15637 639 aaKnown RBP22.29■■□□□ 1.16
LINC00543-201ENST00000567234 SMAD2Q15796 467 aaKnown RBP22.29■■□□□ 1.16
LINC00543-201ENST00000567234 HKDC1Q2TB90 917 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 ZNF773Q6PK81 442 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 R3HCC1LQ7Z5L2 792 aaKnown RBP22.29■■□□□ 1.16
LINC00543-201ENST00000567234 EPHX4Q8IUS5 362 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 SLC44A3Q8N4M1 653 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 DENND6BQ8NEG7 585 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 C12orf66Q96MD2 445 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 INSM2Q96T92 566 aaPredicted RBP22.29■■□□□ 1.16
LINC00543-201ENST00000567234 TBCDQ9BTW9 1192 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 RAB11FIP5Q9BXF6 653 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 BHLHE41Q9C0J9 482 aaPredicted RBP22.29■■□□□ 1.16
LINC00543-201ENST00000567234 REEP4Q9H6H4 257 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 POLR1BQ9H9Y6 1135 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 TAC3Q9UHF0 121 aa22.29■■□□□ 1.16
LINC00543-201ENST00000567234 CFAP20Q9Y6A4 193 aaKnown RBP22.29■■□□□ 1.16
LINC00543-201ENST00000567234 A0A1W2PPW3 197 aa22.28■■□□□ 1.16
LINC00543-201ENST00000567234 FAM149AA5PLN7 773 aa22.28■■□□□ 1.16
LINC00543-201ENST00000567234 SAC3D1A6NKF1 404 aa22.28■■□□□ 1.16
LINC00543-201ENST00000567234 CLIC1O00299 241 aa22.28■■□□□ 1.16
LINC00543-201ENST00000567234 PLOD2O00469 737 aa22.28■■□□□ 1.16
LINC00543-201ENST00000567234 DEAF1O75398 565 aaPredicted RBP22.28■■□□□ 1.16
LINC00543-201ENST00000567234 CREG1O75629 220 aa22.28■■□□□ 1.16
LINC00543-201ENST00000567234 SEC14L2O76054 403 aa22.28■■□□□ 1.16
LINC00543-201ENST00000567234 B3GALT4O96024 378 aa22.28■■□□□ 1.16
LINC00543-201ENST00000567234 TGFB1P01137 390 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms