RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 TUBB1Q9H4B7 451 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 CCDC86Q9H6F5 360 aaKnown RBP7.75□□□□□ -1.17
CDH13-208ENST00000566333 CTSFQ9UBX1 484 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 SLC22A7Q9Y694 548 aa7.75□□□□□ -1.17
CDH13-208ENST00000566333 PIEZO2Q9H5I5 2752 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 IGLV3-12A0A075B6K2 115 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 A0A0A6YYC8 382 aaPredicted RBP7.74□□□□□ -1.17
CDH13-208ENST00000566333 A0A0G2JN53 185 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 LOC101059948A0A1B0GTJ6 334 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 ANKDD1BA6NHY2 528 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 I3L1I5 382 aaPredicted RBP7.74□□□□□ -1.17
CDH13-208ENST00000566333 SGK494L7N484 410 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 TAF4O00268 1085 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 RTCAO00442 366 aaKnown RBP7.74□□□□□ -1.17
CDH13-208ENST00000566333 KLF11O14901 512 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 AZIN1O14977 448 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 DNAJB6O75190 326 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 SH3BGRLO75368 114 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 RDH16O75452 317 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 SEMA3DO95025 777 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 SCELO95171 688 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 TGFB1P01137 390 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 HBQ1P09105 142 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 ALOX12P18054 663 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 WT1P19544 449 aaPredicted RBP7.74□□□□□ -1.17
CDH13-208ENST00000566333 F8A1P23610 371 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 GRK2P25098 689 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 CERS1P27544 350 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 HMOX2P30519 316 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 OR1D4P47884 311 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 SLC1A6P48664 564 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 RAB8AP61006 207 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 ABCE1P61221 599 aaKnown RBP7.74□□□□□ -1.17
CDH13-208ENST00000566333 STXBP1P61764 594 aaKnown RBP7.74□□□□□ -1.17
CDH13-208ENST00000566333 CSTF3Q12996 717 aaKnown RBP7.74□□□□□ -1.17
CDH13-208ENST00000566333 IFT88Q13099 833 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 DSG2Q14126 1118 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 ABRAXAS2Q15018 415 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 HERC3Q15034 1050 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 HIST2H2ACQ16777 129 aaPredicted RBP7.74□□□□□ -1.17
CDH13-208ENST00000566333 SYT16Q17RD7 645 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 FAM214AQ32MH5 1076 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 DEFB134Q4QY38 66 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 XKR7Q5GH72 579 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 SH2D4BQ5SQS7 431 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 DEPDC1Q5TB30 811 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 FAM69BQ5VUD6 431 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 HIST2H2AA3Q6FI13 130 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 ABHD17CQ6PCB6 329 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 FAM199XQ6PEV8 388 aaPredicted RBP7.74□□□□□ -1.17
CDH13-208ENST00000566333 VASH2Q86V25 355 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 PROSER1Q86XN7 944 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 ESX1Q8N693 406 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 ZNF781Q8N8C0 355 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 OR5T3Q8NGG3 340 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 OR2T11Q8NH01 316 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 METTL6Q8TCB7 284 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 AGR3Q8TD06 166 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 SREK1Q8WXA9 508 aaKnown RBP7.74□□□□□ -1.17
CDH13-208ENST00000566333 ZCCHC14Q8WYQ9 949 aaKnown RBP7.74□□□□□ -1.17
CDH13-208ENST00000566333 FGF11Q92914 225 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 NKD1Q969G9 470 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 C11orf24Q96F05 449 aaPredicted RBP7.74□□□□□ -1.17
CDH13-208ENST00000566333 CMTM7Q96FZ5 175 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 DPH2Q9BQC3 489 aaPredicted RBP7.74□□□□□ -1.17
CDH13-208ENST00000566333 SORBS1Q9BX66 1292 aaKnown RBP7.74□□□□□ -1.17
CDH13-208ENST00000566333 REXO4Q9GZR2 422 aaKnown RBP7.74□□□□□ -1.17
CDH13-208ENST00000566333 CHST8Q9H2A9 424 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 ELOVL6Q9H5J4 265 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 BRF2Q9HAW0 419 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 TXLNGQ9NUQ3 528 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 ADGRE2Q9UHX3 823 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 ZDHHC2Q9UIJ5 367 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 CROTQ9UKG9 612 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 SNX6Q9UNH7 406 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 NAALAD2Q9Y3Q0 740 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 CCL27Q9Y4X3 112 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 DNAJC15Q9Y5T4 150 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 MAU2Q9Y6X3 613 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 ATRXP46100 2492 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 IGSF10Q6WRI0 2623 aa7.74□□□□□ -1.17
CDH13-208ENST00000566333 CPAMD8Q8IZJ3 1885 aa7.73□□□□□ -1.17
CDH13-208ENST00000566333 SERTM1A2A2V5 107 aa7.73□□□□□ -1.17
CDH13-208ENST00000566333 NPIPB8E9PQR5 432 aa7.73□□□□□ -1.17
CDH13-208ENST00000566333 H0YIG0 161 aa7.73□□□□□ -1.17
CDH13-208ENST00000566333 SAP18O00422 153 aaKnown RBP7.73□□□□□ -1.17
CDH13-208ENST00000566333 EEDO75530 441 aaKnown RBP7.73□□□□□ -1.17
CDH13-208ENST00000566333 KLF7O75840 302 aaPredicted RBP7.73□□□□□ -1.17
CDH13-208ENST00000566333 HSPA4LO95757 839 aa7.73□□□□□ -1.17
CDH13-208ENST00000566333 KRT6AP02538 564 aa7.73□□□□□ -1.17
CDH13-208ENST00000566333 KRT6BP04259 564 aa7.73□□□□□ -1.17
CDH13-208ENST00000566333 FGF4P08620 206 aa7.73□□□□□ -1.17
CDH13-208ENST00000566333 UROSP10746 265 aa7.73□□□□□ -1.17
CDH13-208ENST00000566333 HSD3B1P14060 373 aa7.73□□□□□ -1.17
CDH13-208ENST00000566333 LIFP15018 202 aa7.73□□□□□ -1.17
CDH13-208ENST00000566333 FBLP22087 321 aaKnown RBP7.73□□□□□ -1.17
CDH13-208ENST00000566333 HSD3B2P26439 372 aa7.73□□□□□ -1.17
CDH13-208ENST00000566333 SERPINB3P29508 390 aa7.73□□□□□ -1.17
CDH13-208ENST00000566333 KRT6CP48668 564 aa7.73□□□□□ -1.17
CDH13-208ENST00000566333 PLA2G16P53816 162 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 270 ms