RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 EBPLQ9BY08 206 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 ZNF717Q9BY31 904 aaPredicted RBP8.21□□□□□ -1.1
TRAF3-209ENST00000560463 IL21RQ9HBE5 538 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 MYNNQ9NPC7 610 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 ATAD3AQ9NVI7 634 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 SEMA5BQ9P283 1151 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 GMEB2Q9UKD1 530 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 KLHL20Q9Y2M5 609 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 RRP15Q9Y3B9 282 aaKnown RBP8.21□□□□□ -1.1
TRAF3-209ENST00000560463 R4GN57 208 aa8.21□□□□□ -1.1
TRAF3-209ENST00000560463 OTOGLQ3ZCN5 2332 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 LY6G6EA0A0G2JKS1 128 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 SLC9B1P1A6NJY1 282 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 SAP18O00422 153 aaKnown RBP8.2□□□□□ -1.1
TRAF3-209ENST00000560463 SCAMP2O15127 329 aaKnown RBP8.2□□□□□ -1.1
TRAF3-209ENST00000560463 ERI3O43414 337 aaKnown RBP8.2□□□□□ -1.1
TRAF3-209ENST00000560463 B4GAT1O43505 415 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 TBX19O60806 448 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 SCELO95171 688 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 PGRP06401 933 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 KLK1P06870 262 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 ZNF806P0C7X5 589 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 MSL3P1P0C860 447 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 SMIM10L1P0DMW3 83 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 CKMT1AP12532 417 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 ITGAXP20702 1163 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 CD1CP29017 333 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 S100A3P33764 101 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 GRK6P43250 576 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 SSR2P43308 183 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 HNRNPFP52597 415 aaKnown RBP8.2□□□□□ -1.1
TRAF3-209ENST00000560463 MAPK12P53778 367 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 PPP1CAP62136 330 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 SKP1P63208 163 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 SLC25A3Q00325 362 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 FOXM1Q08050 763 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 CYP4F3Q08477 520 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 SLC14A1Q13336 389 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 SLC9A5Q14940 896 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 TLR1Q15399 786 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 LPAL2Q16609 132 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 MAPKAPK3Q16644 382 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 TRMT5Q32P41 509 aaKnown RBP8.2□□□□□ -1.1
TRAF3-209ENST00000560463 FAM174BQ3ZCQ3 159 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 VPS26BQ4G0F5 336 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 TIGD2Q4W5G0 525 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 TOR1AIP1Q5JTV8 583 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 TCTE1Q5JU00 501 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 FAM71E1Q6IPT2 247 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 NIPAL1Q6NVV3 410 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 PRMT9Q6P2P2 845 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 ABHD17CQ6PCB6 329 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 FAM92BQ6ZTR7 304 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 ABHD13Q7L211 337 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 DSELQ8IZU8 1212 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 PGAM4Q8N0Y7 254 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 ZCCHC7Q8N3Z6 543 aaKnown RBP8.2□□□□□ -1.1
TRAF3-209ENST00000560463 DNAJC22Q8N4W6 341 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 EID2Q8N6I1 236 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 VPS37AQ8NEZ2 397 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 CLHC1Q8NHS4 586 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 FBXO27Q8NI29 283 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 C16orf78Q8WTQ4 265 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 CCDC74AQ96AQ1 378 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 VPS33AQ96AX1 596 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 ZNF764Q96H86 408 aaPredicted RBP8.2□□□□□ -1.1
TRAF3-209ENST00000560463 SMIM10Q96HG1 83 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 EGLN2Q96KS0 407 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 TGM7Q96PF1 710 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 NPAS2Q99743 824 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 MAP3K3Q99759 626 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 C17orf62Q9BQA9 187 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 GTPBP2Q9BX10 602 aaKnown RBP8.2□□□□□ -1.1
TRAF3-209ENST00000560463 CADM1Q9BY67 442 aaKnown RBP8.2□□□□□ -1.1
TRAF3-209ENST00000560463 BHLHE41Q9C0J9 482 aaPredicted RBP8.2□□□□□ -1.1
TRAF3-209ENST00000560463 IRF2BPLQ9H1B7 796 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 REEP4Q9H6H4 257 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 RMND5AQ9H871 391 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 COPS7BQ9H9Q2 264 aaPredicted RBP8.2□□□□□ -1.1
TRAF3-209ENST00000560463 WDR41Q9HAD4 459 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 PDE7BQ9NP56 450 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 FSCN3Q9NQT6 498 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 PRDM7Q9NQW5 492 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 ENAMQ9NRM1 1142 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 FAM120CQ9NX05 1096 aaKnown RBP8.2□□□□□ -1.1
TRAF3-209ENST00000560463 LYARQ9NX58 379 aaKnown RBP8.2□□□□□ -1.1
TRAF3-209ENST00000560463 ATP6V1HQ9UI12 483 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 PRPF19Q9UMS4 504 aaKnown RBP8.2□□□□□ -1.1
TRAF3-209ENST00000560463 U3KQA8 63 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 CUL9Q8IWT3 2517 aa8.2□□□□□ -1.1
TRAF3-209ENST00000560463 A0A0A6YYD5 115 aa8.19□□□□□ -1.1
TRAF3-209ENST00000560463 C15orf38-AP3S2A0A0A6YYH1 394 aa8.19□□□□□ -1.1
TRAF3-209ENST00000560463 IGHV5-51A0A0C4DH38 117 aa8.19□□□□□ -1.1
TRAF3-209ENST00000560463 ANKRD65E5RJM6 399 aa8.19□□□□□ -1.1
TRAF3-209ENST00000560463 H0YGG7 62 aa8.19□□□□□ -1.1
TRAF3-209ENST00000560463 FLRT2O43155 660 aa8.19□□□□□ -1.1
TRAF3-209ENST00000560463 LRP3O75074 770 aa8.19□□□□□ -1.1
TRAF3-209ENST00000560463 ERN1O75460 977 aaKnown RBP8.19□□□□□ -1.1
TRAF3-209ENST00000560463 KCNH1O95259 989 aa8.19□□□□□ -1.1
TRAF3-209ENST00000560463 CPNE6O95741 557 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms