RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 GBP4Q96PP9 640 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 SECISBP2Q96T21 854 aaKnown RBP4.83□□□□□ -1.64
SPG11-208ENST00000558155 CHP1Q99653 195 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 FAM118BQ9BPY3 351 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 CCDC77Q9BR77 488 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 PCBD2Q9H0N5 130 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 P2RY12Q9H244 342 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 LDAHQ9H6V9 325 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 EXO5Q9H790 373 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 ZDHHC11Q9H8X9 412 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 SYNPO2LQ9H987 977 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 CLK4Q9HAZ1 481 aaKnown RBP4.83□□□□□ -1.64
SPG11-208ENST00000558155 LANCL2Q9NS86 450 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 SPTLC3Q9NUV7 552 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 KCMF1Q9P0J7 381 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 MTRF1LQ9UGC7 380 aaKnown RBP4.83□□□□□ -1.64
SPG11-208ENST00000558155 SLC2A6Q9UGQ3 507 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 FBXW2Q9UKT8 454 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 CBLCQ9ULV8 474 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 RUVBL2Q9Y230 463 aaKnown RBP4.83□□□□□ -1.64
SPG11-208ENST00000558155 YARS2Q9Y2Z4 477 aaKnown RBP4.83□□□□□ -1.64
SPG11-208ENST00000558155 NAALAD2Q9Y3Q0 740 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 PCDHA3Q9Y5H8 950 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 DCHS2Q6V1P9 2916 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 ARHGAP21Q5T5U3 1957 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 EML6Q6ZMW3 1958 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 TACC2O95359 2948 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 FBN3Q75N90 2809 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 A0A1B0GVC2 190 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 KRT87PA6NCN2 255 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 FAM166BA8MTA8 275 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 A8MUA0 341 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 A8MVJ9 347 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 E7EVH7 732 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 GOLGA6L19H0YKK7 550 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 AQP7O14520 342 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 DVL2O14641 736 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 PJA2O43164 708 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 CHST10O43529 356 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 SUSD5O60279 629 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 ITGA10O75578 1167 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 ZFAND5O76080 213 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 SLC16A8O95907 504 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 SYF2O95926 243 aaKnown RBP4.82□□□□□ -1.64
SPG11-208ENST00000558155 MBD3O95983 291 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 IGHG3P01860 377 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 C8BP07358 591 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 SLC35G6P0C7Q6 338 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 STIP1P31948 543 aaKnown RBP4.82□□□□□ -1.64
SPG11-208ENST00000558155 PTPN7P35236 360 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 FDFT1P37268 417 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 ADH7P40394 386 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 MAGEA1P43355 309 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 MARCKSL1P49006 195 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 ASCL1P50553 236 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 SSR4P51571 173 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 RWDD2BP57060 319 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 TRIM14Q14142 442 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 PCBP2Q15366 365 aaKnown RBP eCLIP4.82□□□□□ -1.64
SPG11-208ENST00000558155 RPS6KA1Q15418 735 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 SF3B4Q15427 424 aaKnown RBP eCLIP4.82□□□□□ -1.64
SPG11-208ENST00000558155 TYSND1Q2T9J0 566 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 KLHL38Q2WGJ6 581 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.82□□□□□ -1.64
SPG11-208ENST00000558155 PCID2Q5JVF3 399 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 CATSPEREQ5SY80 951 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 XP32Q5T750 250 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 CAPN13Q6MZZ7 669 aaPredicted RBP4.82□□□□□ -1.64
SPG11-208ENST00000558155 QSOX2Q6ZRP7 698 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 GK5Q6ZS86 529 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 TRILQ7L0X0 811 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 PRSS41Q7RTY9 318 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 MAATS1Q7Z4T9 603 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 VN1R4Q7Z5H5 301 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 SLC26A11Q86WA9 606 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 SHISA5Q8N114 240 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 LRRC75A-AS1Q8N1F1 130 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 FAM109AQ8N4B1 249 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 TBC1D19Q8N5T2 526 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 OTUD6BQ8N6M0 293 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 KCT2Q8NC54 265 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 FBXO15Q8NCQ5 510 aaPredicted RBP4.82□□□□□ -1.64
SPG11-208ENST00000558155 PPFIBP2Q8ND30 876 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 PSD4Q8NDX1 1056 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 NFAM1Q8NET5 270 aaPredicted RBP4.82□□□□□ -1.64
SPG11-208ENST00000558155 PPHLN1Q8NEY8 458 aaKnown RBP4.82□□□□□ -1.64
SPG11-208ENST00000558155 B3GNT7Q8NFL0 401 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 OR2M7Q8NG81 312 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 OR5T3Q8NGG3 340 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 ZCCHC10Q8TBK6 192 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 ZNF480Q8WV37 535 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 ASB15Q8WXK1 588 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 KRT35Q92764 455 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 CALR3Q96L12 384 aaKnown RBP4.82□□□□□ -1.64
SPG11-208ENST00000558155 ZNF778Q96MU6 729 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 CDK15Q96Q40 435 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 TCF12Q99081 682 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 DNAJC7Q99615 494 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 MACROD1Q9BQ69 325 aa4.82□□□□□ -1.64
SPG11-208ENST00000558155 YIPF4Q9BSR8 244 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms