RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 FRAT2O75474 233 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 NEBLO76041 1014 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 ECDO95905 644 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 ASNSP08243 561 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 EPORP19235 508 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 MARK3P27448 753 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 MAPK12P53778 367 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 SLC12A3P55017 1021 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 SLC8A3P57103 927 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 SULT2A1Q06520 285 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 CCDC173Q0VFZ6 552 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 MXD4Q14582 209 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 MOGQ16653 247 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 ODF4Q2M2E3 257 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 MCMDC2Q4G0Z9 681 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 SLC39A12Q504Y0 691 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 HERC4Q5GLZ8 1057 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 TWF2Q6IBS0 349 aaKnown RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 ANGPTL8Q6UXH0 198 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 RCOR2Q8IZ40 523 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 THAP8Q8NA92 274 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 DENND6BQ8NEG7 585 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 DMBX1Q8NFW5 382 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 VANGL1Q8TAA9 524 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 RAB3IL1Q8TBN0 382 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 HCAR2Q8TDS4 363 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 CD101Q93033 1021 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 OTUB1Q96FW1 271 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 C7orf34Q96L11 122 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 C16orf45Q96MC5 204 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 ZNF560Q96MR9 790 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 GDAP1L1Q96MZ0 367 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 PGLYRP2Q96PD5 576 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 DUX3Q96PT4 197 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 CDCA3Q99618 268 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 CIB1Q99828 191 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 TBCDQ9BTW9 1192 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 THUMPD3Q9BV44 507 aaKnown RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 HSD3B7Q9H2F3 369 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 C10orf88Q9H8K7 445 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 TUFT1Q9NNX1 390 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 HPS4Q9NQG7 708 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 GPR173Q9NS66 373 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 OR6C2Q9NZP2 312 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 MALT1Q9UDY8 824 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 SH3BGRL2Q9UJC5 107 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 KCNS2Q9ULS6 477 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 BZW2Q9Y6E2 419 aaKnown RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 PFASO15067 1338 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 SERINC4A6NH21 518 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 H0YC42 278 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 H0YIV9 168 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 LSM1O15116 133 aaKnown RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 CYTH3O43739 400 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 SNX3O60493 162 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 ZWINTO95229 277 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 PGLSO95336 258 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 RHOXF2BP0C7M4 288 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 DLATP10515 647 aaKnown RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 ZNF3P17036 446 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 CKMT2P17540 419 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 CPN2P22792 545 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 U2AF2P26368 475 aaKnown RBP eCLIP1.54□□□□□ -2.165e-9■■■■□ 19.5
HIF1A-212ENST00000557538 TKTL1P51854 596 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 OR1D5P58170 312 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 ASIC1P78348 528 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 TAF10Q12962 218 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 GPR17Q13304 367 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 ALX1Q15699 326 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 LETM2Q2VYF4 491 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 KRTAP24-1Q3LI83 254 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 ANKRD20A4Q4UJ75 823 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 ANKRD20A8PQ5CZ79 823 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 ANKRD20A2Q5SQ80 823 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 ANKRD20A1Q5TYW2 823 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 ANKRD20A3Q5VUR7 823 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 IL23RQ5VWK5 629 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 G2E3Q7L622 706 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 PRUNE1Q86TP1 453 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 CCAR2Q8N163 923 aaKnown RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 PRSS35Q8N3Z0 413 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 LIX1Q8N485 282 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 LMNTD1Q8N9Z9 388 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 OR5AP2Q8NGF4 316 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 OR8K3Q8NH51 312 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 GATAD1Q8WUU5 269 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 PROX1Q92786 737 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 KIFAP3Q92845 792 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 FAM71F1Q96KD3 344 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 C10orf90Q96M02 699 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 TCEANC2Q96MN5 208 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 TTC25Q96NG3 672 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 CATSPER2Q96P56 530 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 TSSK2Q96PF2 358 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 RHOXF2Q9BQY4 288 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 ERP44Q9BS26 406 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 CCM2Q9BSQ5 444 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 C9orf16Q9BUW7 83 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 MRPL37Q9BZE1 423 aaKnown RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 NYXQ9GZU5 481 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms