RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 APOL3O95236 402 aa14.72□□□□□ -0.05
TMEM55B-207ENST00000557041 MMP12P39900 470 aa14.72□□□□□ -0.05
TMEM55B-207ENST00000557041 PPIGQ13427 754 aaKnown RBP eCLIP14.72□□□□□ -0.054e-9■■□□□ 14.4
TMEM55B-207ENST00000557041 LSRQ86X29 649 aaPredicted RBP14.72□□□□□ -0.05
TMEM55B-207ENST00000557041 OR10G6Q8NH81 332 aa14.72□□□□□ -0.05
TMEM55B-207ENST00000557041 STARD8Q92502 1023 aa14.72□□□□□ -0.05
TMEM55B-207ENST00000557041 FGF13Q92913 245 aa14.72□□□□□ -0.05
TMEM55B-207ENST00000557041 DTD2Q96FN9 168 aa14.72□□□□□ -0.05
TMEM55B-207ENST00000557041 COL21A1Q96P44 957 aa14.72□□□□□ -0.05
TMEM55B-207ENST00000557041 CHCHD6Q9BRQ6 235 aa14.72□□□□□ -0.05
TMEM55B-207ENST00000557041 EFCAB11Q9BUY7 163 aa14.72□□□□□ -0.05
TMEM55B-207ENST00000557041 ABCB10Q9NRK6 738 aa14.72□□□□□ -0.05
TMEM55B-207ENST00000557041 CACNA1IQ9P0X4 2223 aa14.72□□□□□ -0.05
TMEM55B-207ENST00000557041 CACNA1CQ13936 2221 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 TRBC2A0A5B9 178 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 RFXAPO00287 272 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 AP2A2O94973 939 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 C21orf33P30042 268 aaPredicted RBP14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 GDI1P31150 447 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 ATP6V1E1P36543 226 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 TAP2Q03519 686 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 SPATS1Q496A3 300 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 ZNF385BQ569K4 471 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 ERN2Q76MJ5 926 aaKnown RBP14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 SLC5A8Q8N695 610 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 RPL3LQ92901 407 aaKnown RBP14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 AIF1LQ9BQI0 150 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 ABCG4Q9H172 646 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 MIR1-1HGQ9H1L0 117 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 SLC6A17Q9H1V8 727 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 IL1RAPQ9NPH3 570 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 PSME2Q9UL46 239 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 SPTBP11277 2137 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 TRPM6Q9BX84 2022 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 PATJQ8NI35 1801 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 PPM1DO15297 605 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 CD36P16671 472 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 NPPBP16860 134 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 GRK3P35626 688 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 SLC19A1P41440 591 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 ELAVL3Q14576 367 aaKnown RBP14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 GPAT3Q53EU6 434 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 IFI44LQ53G44 452 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 FAM78AQ5JUQ0 283 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 P2RY8Q86VZ1 359 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 ZZZ3Q8IYH5 903 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 CEP19Q96LK0 163 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 KCNK12Q9HB15 430 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 TM9SF3Q9HD45 589 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 ZNF282Q9UDV7 671 aaPredicted RBP14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 SEC14L3Q9UDX4 400 aa14.71□□□□□ -0.05
TMEM55B-207ENST00000557041 PRKRAO75569 313 aaKnown RBP14.71□□□□□ -0.06
TMEM55B-207ENST00000557041 SLCO2B1O94956 709 aa14.71□□□□□ -0.06
TMEM55B-207ENST00000557041 PRSS23O95084 383 aa14.71□□□□□ -0.06
TMEM55B-207ENST00000557041 GADD45GO95257 159 aa14.71□□□□□ -0.06
TMEM55B-207ENST00000557041 RPS3AP61247 264 aaKnown RBP14.71□□□□□ -0.06
TMEM55B-207ENST00000557041 CTBSQ01459 385 aa14.71□□□□□ -0.06
TMEM55B-207ENST00000557041 RBM48Q5RL73 367 aaKnown RBP14.71□□□□□ -0.06
TMEM55B-207ENST00000557041 GRHL2Q6ISB3 625 aa14.71□□□□□ -0.06
TMEM55B-207ENST00000557041 PSD4Q8NDX1 1056 aa14.71□□□□□ -0.06
TMEM55B-207ENST00000557041 PCDHGB3Q9Y5G1 929 aa14.71□□□□□ -0.06
TMEM55B-207ENST00000557041 A0A0J9YVX5 310 aa14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 TGFBR1P36897 503 aa14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 PRLHRP49683 370 aa14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 NPRL3Q12980 569 aa14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 EXOC3L2Q2M3D2 409 aa14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 FAM109BQ6ICB4 259 aaPredicted RBP14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 PTCHD4Q6ZW05 846 aa14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 C16orf78Q8WTQ4 265 aa14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 RAB2BQ8WUD1 216 aa14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 UBTD2Q8WUN7 234 aa14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 HDAC2Q92769 488 aaKnown RBP14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 MBOAT4Q96T53 435 aa14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 LGR4Q9BXB1 951 aa14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 SLC6A16Q9GZN6 736 aa14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 TUBA8Q9NY65 449 aaPredicted RBP14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 IFNA14P01570 189 aa14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 IL12RB1P42701 662 aa14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 EMX1Q04741 257 aaPredicted RBP14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 ZNF77Q15935 545 aa14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 EGFLAMQ63HQ2 1017 aa14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 SLCO4C1Q6ZQN7 724 aa14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 FAM83HQ6ZRV2 1179 aaPredicted RBP14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 CPA6Q8N4T0 437 aa14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 NCSTNQ92542 709 aa14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 TESCQ96BS2 214 aa14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 POLE4Q9NR33 117 aa14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 ZCCHC3Q9NUD5 404 aaKnown RBP14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 CLCA2Q9UQC9 943 aa14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 ANGPT4Q9Y264 503 aa14.7□□□□□ -0.06
TMEM55B-207ENST00000557041 C9P02748 559 aa14.69□□□□□ -0.06
TMEM55B-207ENST00000557041 BMXP51813 675 aa14.69□□□□□ -0.06
TMEM55B-207ENST00000557041 PPP2R2BQ00005 443 aa14.69□□□□□ -0.06
TMEM55B-207ENST00000557041 SPCS2Q15005 226 aa14.69□□□□□ -0.06
TMEM55B-207ENST00000557041 C9orf64Q5T6V5 341 aa14.69□□□□□ -0.06
TMEM55B-207ENST00000557041 KIAA1614Q5VZ46 1190 aa14.69□□□□□ -0.06
TMEM55B-207ENST00000557041 NXPE4Q6UWF7 544 aa14.69□□□□□ -0.06
TMEM55B-207ENST00000557041 KIAA1324Q6UXG2 1013 aaKnown RBP14.69□□□□□ -0.06
TMEM55B-207ENST00000557041 EIF3MQ7L2H7 374 aaKnown RBP14.69□□□□□ -0.06
TMEM55B-207ENST00000557041 SLC15A4Q8N697 577 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 723.3 ms