RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 PTRH2Q9Y3E5 179 aaKnown RBP9.14□□□□□ -0.95
SRP54-210ENST00000556380 TSC22D4Q9Y3Q8 395 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 KCNMB2Q9Y691 235 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 MED13Q9UHV7 2174 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 PCSK5Q92824 1860 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 A0A1B0GTL3 188 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 TLDC2A0PJX2 215 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 G3V2L1 256 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 PPP6CO00743 305 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 FFAR3O14843 346 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 ATXN7O15265 892 aaPredicted RBP9.13□□□□□ -0.95
SRP54-210ENST00000556380 GPR42O15529 346 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 UGDHO60701 494 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 GALR3O60755 368 aaPredicted RBP9.13□□□□□ -0.95
SRP54-210ENST00000556380 KLHL18O94889 574 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 BMP10O95393 424 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 B3GALT4O96024 378 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 PROCP04070 461 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 SERPIND1P05546 499 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 ZNF888P0CJ79 500 aaPredicted RBP9.13□□□□□ -0.95
SRP54-210ENST00000556380 ALOX12P18054 663 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 IL1RNP18510 177 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 KRT15P19012 456 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 FBLP22087 321 aaKnown RBP9.13□□□□□ -0.95
SRP54-210ENST00000556380 MMP11P24347 488 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 ATP5F1P24539 256 aaPredicted RBP9.13□□□□□ -0.95
SRP54-210ENST00000556380 HNRNPH1P31943 449 aaKnown RBP9.13□□□□□ -0.95
SRP54-210ENST00000556380 AVPR1BP47901 424 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 PIK3CGP48736 1102 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 PRKAA2P54646 552 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 HERVK_113P63132 956 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 MAT1AQ00266 395 aaKnown RBP9.13□□□□□ -0.95
SRP54-210ENST00000556380 KLC1Q07866 573 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 RGS1Q08116 209 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 ZNF844Q08AG5 666 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 TRAF3Q13114 568 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 HERC3Q15034 1050 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 SYT16Q17RD7 645 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 UNC50Q53HI1 259 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 PAGE2BQ5JRK9 111 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 LIPJQ5W064 366 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 GRHL2Q6ISB3 625 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 BORAQ6PGQ7 559 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 SHISA6Q6ZSJ9 500 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 MED25Q71SY5 747 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 UBE3DQ7Z6J8 389 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 MRGPREQ86SM8 312 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 TRABD2AQ86V40 505 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 APLFQ8IW19 511 aaPredicted RBP9.13□□□□□ -0.95
SRP54-210ENST00000556380 ZC3H7AQ8IWR0 971 aaKnown RBP9.13□□□□□ -0.95
SRP54-210ENST00000556380 OR7G3Q8NG95 312 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 OR52B6Q8NGF0 335 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 ZCCHC10Q8TBK6 192 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 RNF217Q8TC41 542 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 ZNF473Q8WTR7 871 aaKnown RBP9.13□□□□□ -0.95
SRP54-210ENST00000556380 NANOS1Q8WY41 292 aaKnown RBP9.13□□□□□ -0.95
SRP54-210ENST00000556380 NACC2Q96BF6 587 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 MS4A6EQ96DS6 147 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 QRFPRQ96P65 431 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 UBL7Q96S82 380 aaPredicted RBP9.13□□□□□ -0.95
SRP54-210ENST00000556380 NTMT1Q9BV86 223 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 ERVK-6Q9BXR3 956 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 NOL11Q9H8H0 719 aaKnown RBP9.13□□□□□ -0.95
SRP54-210ENST00000556380 CLK4Q9HAZ1 481 aaKnown RBP9.13□□□□□ -0.95
SRP54-210ENST00000556380 ANKHQ9HCJ1 492 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 MKKSQ9NPJ1 570 aaPredicted RBP9.13□□□□□ -0.95
SRP54-210ENST00000556380 TRPC4Q9UBN4 977 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 ZNF225Q9UK10 706 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 NXT1Q9UKK6 140 aaKnown RBP9.13□□□□□ -0.95
SRP54-210ENST00000556380 PLAAQ9Y263 795 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 RNF11Q9Y3C5 154 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 NAALAD2Q9Y3Q0 740 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 CCDC88CQ9P219 2028 aa9.13□□□□□ -0.95
SRP54-210ENST00000556380 COL6A6A6NMZ7 2263 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 A0A1W2PQ72 361 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 H0YIV9 168 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 SOCS6O14544 535 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 PRPF4O43172 522 aaKnown RBP eCLIP9.12□□□□□ -0.95
SRP54-210ENST00000556380 CHST10O43529 356 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 PLIN3O60664 434 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 GLRA3O75311 464 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 RDH16O75452 317 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 JRKO75564 520 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 KRT4P19013 534 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 IMPDH1P20839 514 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 HNF4AP41235 474 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 FOLR3P41439 243 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 PIK3CBP42338 1070 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 CCR10P46092 362 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 CCT5P48643 541 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 RAB8AP61006 207 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 STXBP1P61764 594 aaKnown RBP9.12□□□□□ -0.95
SRP54-210ENST00000556380 OCA2Q04671 838 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 IFFO1Q0D2I5 559 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 ATP1A4Q13733 1029 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 HIST2H2ACQ16777 129 aaPredicted RBP9.12□□□□□ -0.95
SRP54-210ENST00000556380 DEFB134Q4QY38 66 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 TNFAIP8L3Q5GJ75 292 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 TOR1AIP1Q5JTV8 583 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 ZNF678Q5SXM1 525 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms