RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 TYRP14679 529 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 GPR1P46091 355 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 ST8SIA6P61647 398 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 CDK6Q00534 326 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 GBX1Q14549 363 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 RGNQ15493 299 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 MED27Q6P2C8 311 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 SHFQ7M4L6 423 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 ARMC8Q8IUR7 673 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 ZFP41Q8N8Y5 198 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 FKBP10Q96AY3 582 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 DOK1Q99704 481 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 ASAH2Q9NR71 780 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 SRRDQ9UH36 339 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 RANBP2P49792 3224 aaKnown RBP11.4□□□□□ -0.58
XRCC3-208ENST00000554811 CXCL14O95715 111 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 PABPC1P11940 636 aaKnown RBP11.4□□□□□ -0.58
XRCC3-208ENST00000554811 MAPK8P45983 427 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 GABARAPL2P60520 117 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 TBPL1P62380 186 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 TLE2Q04725 743 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 PTOV1Q86YD1 416 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 OR9Q1Q8NGQ5 310 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 TTLL2Q9BWV7 592 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 NDEL1Q9GZM8 345 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 STOX2Q9P2F5 926 aaPredicted RBP11.4□□□□□ -0.58
XRCC3-208ENST00000554811 RABL2BQ9UNT1 228 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 ERVK-11Q9UQG0 969 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 NEUROG3Q9Y4Z2 214 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 A0A1W2PRB8 838 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 FEZF1A0PJY2 475 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 RFXAPO00287 272 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 ATG13O75143 517 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 CH25HO95992 272 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 RPLP0P05388 317 aaKnown RBP11.39□□□□□ -0.59
XRCC3-208ENST00000554811 IL3P08700 152 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 SSTR4P31391 388 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 SLC16A1P53985 500 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 DEFA1P59665 94 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 DEFA3P59666 94 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 PFN3P60673 137 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 DEFB103AP81534 67 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.39□□□□□ -0.59
XRCC3-208ENST00000554811 CLEC12AQ5QGZ9 265 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 DESI1Q6ICB0 168 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 ERICH5Q6P6B1 374 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 CASP12Q6UXS9 341 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 CEACAM20Q6UY09 585 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 OR6Q1Q8NGQ2 317 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 SLC38A4Q969I6 547 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 IL20RAQ9UHF4 553 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 PCM1Q15154 2024 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 ALPK2Q86TB3 2170 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 PTPRDP23468 1912 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 UNCXA6NJT0 531 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 SLC28A2O43868 658 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 KIAA0513O60268 411 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 AP2A2O94973 939 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 GABARAPO95166 117 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 FHP07954 510 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 JUNBP17275 347 aaPredicted RBP11.39□□□□□ -0.59
XRCC3-208ENST00000554811 CNR2P34972 360 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 BUD31P41223 144 aaPredicted RBP11.39□□□□□ -0.59
XRCC3-208ENST00000554811 NRIP1P48552 1158 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 INPP1P49441 399 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 METAP1P53582 386 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 PTPN5P54829 565 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 TMEM115Q12893 351 aaPredicted RBP11.39□□□□□ -0.59
XRCC3-208ENST00000554811 SLC5A12Q1EHB4 618 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 ZNF385BQ569K4 471 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 STEAP3Q658P3 488 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 COMMD6Q7Z4G1 85 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 TSPYL5Q86VY4 417 aaPredicted RBP11.39□□□□□ -0.59
XRCC3-208ENST00000554811 CCDC71Q8IV32 467 aaPredicted RBP11.39□□□□□ -0.59
XRCC3-208ENST00000554811 COL26A1Q96A83 441 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 DOHHQ9BU89 302 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 NLNQ9BYT8 704 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 PALMDQ9NP74 551 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 WASHC1A8K0Z3 465 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 SCAMP2O15127 329 aaKnown RBP11.39□□□□□ -0.59
XRCC3-208ENST00000554811 ADAMDEC1O15204 470 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 AQP9O43315 295 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 SSX4O60224 188 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 PCMT1P22061 227 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 RPS3P23396 243 aaKnown RBP eCLIP11.39□□□□□ -0.59
XRCC3-208ENST00000554811 RAB25P57735 213 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 CAPN13Q6MZZ7 669 aaPredicted RBP11.39□□□□□ -0.59
XRCC3-208ENST00000554811 WASH2PQ6VEQ5 465 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 CELF2-AS1Q8N7Q2 184 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 C2orf15Q8WU43 125 aaKnown RBP11.39□□□□□ -0.59
XRCC3-208ENST00000554811 COL21A1Q96P44 957 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 TMEM39AQ9NV64 488 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 BOLA1Q9Y3E2 137 aa11.39□□□□□ -0.59
XRCC3-208ENST00000554811 TRIM64CA6NLI5 447 aa11.38□□□□□ -0.59
XRCC3-208ENST00000554811 GRM6O15303 877 aa11.38□□□□□ -0.59
XRCC3-208ENST00000554811 SGTAO43765 313 aa11.38□□□□□ -0.59
XRCC3-208ENST00000554811 IFNW1P05000 195 aa11.38□□□□□ -0.59
XRCC3-208ENST00000554811 INHBBP09529 407 aa11.38□□□□□ -0.59
XRCC3-208ENST00000554811 HOXA9P31269 272 aa11.38□□□□□ -0.59
XRCC3-208ENST00000554811 MLLT1Q03111 559 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms