RNA–Protein interactions for RNA: ENST00000554546.5

NUMB-212, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-212ENST00000554546 TMEM43Q9BTV4 400 aa10.9□□□□□ -0.66
NUMB-212ENST00000554546 PDGFCQ9NRA1 345 aa10.9□□□□□ -0.66
NUMB-212ENST00000554546 VNN3Q9NY84 501 aa10.9□□□□□ -0.66
NUMB-212ENST00000554546 PSORS1C1Q9UIG5 152 aa10.9□□□□□ -0.66
NUMB-212ENST00000554546 OR6C68A6NDL8 312 aa10.9□□□□□ -0.66
NUMB-212ENST00000554546 TMEM200CA6NKL6 621 aa10.9□□□□□ -0.66
NUMB-212ENST00000554546 GPR31O00270 319 aa10.9□□□□□ -0.66
NUMB-212ENST00000554546 HOXA2O43364 376 aa10.9□□□□□ -0.66
NUMB-212ENST00000554546 CA12O43570 354 aa10.9□□□□□ -0.66
NUMB-212ENST00000554546 ULK1O75385 1050 aa10.9□□□□□ -0.66
NUMB-212ENST00000554546 AP2A2O94973 939 aa10.9□□□□□ -0.66
NUMB-212ENST00000554546 HIST1H2AGP0C0S8 130 aaPredicted RBP10.9□□□□□ -0.66
NUMB-212ENST00000554546 HIST1H2ADP20671 130 aa10.9□□□□□ -0.66
NUMB-212ENST00000554546 ASPAP45381 313 aa10.9□□□□□ -0.66
NUMB-212ENST00000554546 RNF144AP50876 292 aaPredicted RBP10.9□□□□□ -0.66
NUMB-212ENST00000554546 HNRNPA0Q13151 305 aaKnown RBP10.9□□□□□ -0.66
NUMB-212ENST00000554546 TEX30Q5JUR7 227 aa10.9□□□□□ -0.66
NUMB-212ENST00000554546 HIST2H2AA3Q6FI13 130 aa10.9□□□□□ -0.66
NUMB-212ENST00000554546 Q6ZPB1 254 aaPredicted RBP10.9□□□□□ -0.66
NUMB-212ENST00000554546 ADGRF3Q8IZF5 1079 aa10.9□□□□□ -0.66
NUMB-212ENST00000554546 HIST1H2AHQ96KK5 128 aa10.9□□□□□ -0.66
NUMB-212ENST00000554546 HIST1H2AJQ99878 128 aa10.9□□□□□ -0.66
NUMB-212ENST00000554546 ADAT1Q9BUB4 502 aaKnown RBP10.9□□□□□ -0.66
NUMB-212ENST00000554546 JAM3Q9BX67 310 aa10.9□□□□□ -0.66
NUMB-212ENST00000554546 APOBEC3GQ9HC16 384 aaKnown RBP10.9□□□□□ -0.66
NUMB-212ENST00000554546 ATP13A1Q9HD20 1204 aa10.9□□□□□ -0.66
NUMB-212ENST00000554546 DMRT1Q9Y5R6 373 aa10.9□□□□□ -0.66
NUMB-212ENST00000554546 SDC3O75056 442 aa10.9□□□□□ -0.67
NUMB-212ENST00000554546 CDRT1O95170 752 aa10.9□□□□□ -0.67
NUMB-212ENST00000554546 ITGBL1O95965 494 aaPredicted RBP10.9□□□□□ -0.67
NUMB-212ENST00000554546 LCN1P31025 176 aa10.9□□□□□ -0.67
NUMB-212ENST00000554546 ASMTP46597 345 aa10.9□□□□□ -0.67
NUMB-212ENST00000554546 EMX2Q04743 252 aa10.9□□□□□ -0.67
NUMB-212ENST00000554546 CYP24A1Q07973 514 aa10.9□□□□□ -0.67
NUMB-212ENST00000554546 RNF212Q495C1 297 aa10.9□□□□□ -0.67
NUMB-212ENST00000554546 DDI2Q5TDH0 399 aa10.9□□□□□ -0.67
NUMB-212ENST00000554546 FAM198BQ6UWH4 519 aa10.9□□□□□ -0.67
NUMB-212ENST00000554546 CDKL3Q8IVW4 592 aaPredicted RBP10.9□□□□□ -0.67
NUMB-212ENST00000554546 KDF1Q8NAX2 398 aaPredicted RBP10.9□□□□□ -0.67
NUMB-212ENST00000554546 OR14A16Q8NHC5 309 aa10.9□□□□□ -0.67
NUMB-212ENST00000554546 CREB3L4Q8TEY5 395 aa10.9□□□□□ -0.67
NUMB-212ENST00000554546 TMEM41AQ96HV5 264 aa10.9□□□□□ -0.67
NUMB-212ENST00000554546 BBS4Q96RK4 519 aa10.9□□□□□ -0.67
NUMB-212ENST00000554546 NEU1Q99519 415 aa10.9□□□□□ -0.67
NUMB-212ENST00000554546 TCF25Q9BQ70 676 aa10.9□□□□□ -0.67
NUMB-212ENST00000554546 CCM2Q9BSQ5 444 aa10.9□□□□□ -0.67
NUMB-212ENST00000554546 TRIM62Q9BVG3 475 aa10.9□□□□□ -0.67
NUMB-212ENST00000554546 DHCR7Q9UBM7 475 aaKnown RBP10.9□□□□□ -0.67
NUMB-212ENST00000554546 SPASTQ9UBP0 616 aa10.9□□□□□ -0.67
NUMB-212ENST00000554546 POMT2Q9UKY4 750 aa10.9□□□□□ -0.67
NUMB-212ENST00000554546 AP1M2Q9Y6Q5 423 aa10.9□□□□□ -0.67
NUMB-212ENST00000554546 CHD5Q8TDI0 1954 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 DISC1C4P0D8 188 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 UBFD1O14562 309 aaKnown RBP10.89□□□□□ -0.67
NUMB-212ENST00000554546 RBBP9O75884 186 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 SPI1P17947 270 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 KCNJ10P78508 379 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 ST3GAL4Q11206 333 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 POU4F2Q12837 409 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 IL18Q14116 193 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 GANABQ14697 944 aaKnown RBP10.89□□□□□ -0.67
NUMB-212ENST00000554546 NR6A1Q15406 480 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 STRIP1Q5VSL9 837 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 SLC43A2Q8N370 569 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 OTULINQ96BN8 352 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 TSNAXQ99598 290 aaKnown RBP10.89□□□□□ -0.67
NUMB-212ENST00000554546 TGIF2Q9GZN2 237 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 RIMS4Q9H426 269 aaPredicted RBP10.89□□□□□ -0.67
NUMB-212ENST00000554546 B3GAT2Q9NPZ5 323 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 MED11Q9P086 117 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 PISDQ9UG56 409 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 POLG2Q9UHN1 485 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 CAMTA1Q9Y6Y1 1673 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 OR2W5A6NFC9 320 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 CLCA1A8K7I4 914 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 NUDT7P0C024 238 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 MLNP12872 115 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 GGT1P19440 569 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 GPR143P51810 404 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 MICBQ29980 383 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 KANK2Q63ZY3 851 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 FAM109BQ6ICB4 259 aaPredicted RBP10.89□□□□□ -0.67
NUMB-212ENST00000554546 ZCCHC12Q6PEW1 402 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 WDTC1Q8N5D0 677 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 COLGALT1Q8NBJ5 622 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 BEST4Q8NFU0 473 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 DMRTA2Q96SC8 542 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 SARGQ9BW04 601 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 OR51J1Q9H342 316 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 C11orf49Q9H6J7 331 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 TREM2Q9NZC2 230 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 COMMD3Q9UBI1 195 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 LEF1Q9UJU2 399 aaPredicted RBP10.89□□□□□ -0.67
NUMB-212ENST00000554546 DHRS7Q9Y394 339 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 ARHGEF33A8MVX0 844 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 PIP5K1BO14986 540 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 PEX10O60683 326 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 AKR7A3O95154 331 aa10.89□□□□□ -0.67
NUMB-212ENST00000554546 PRKAR2AP13861 404 aaKnown RBP10.89□□□□□ -0.67
NUMB-212ENST00000554546 CASP9P55211 416 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms