RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 FAM217AQ8IXS0 508 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 DMRTC2Q8IXT2 367 aaPredicted RBP9.21□□□□□ -0.94
SIX4-202ENST00000554079 CLDN22Q8N7P3 220 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 DNAJC5GQ8N7S2 189 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 OR2T29Q8NH02 315 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 OR10A6Q8NH74 314 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 PROKR1Q8TCW9 393 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 POF1BQ8WVV4 589 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 ZDHHC12Q96GR4 267 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 ZBTB45Q96K62 511 aaPredicted RBP9.21□□□□□ -0.94
SIX4-202ENST00000554079 HTATIP2Q9BUP3 242 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 DNTTIP1Q9H147 329 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 BRD9Q9H8M2 597 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 TMEM45AQ9NWC5 275 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 PDP1Q9P0J1 537 aaPredicted RBP9.21□□□□□ -0.94
SIX4-202ENST00000554079 VAPAQ9P0L0 249 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 IKZF3Q9UKT9 509 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 PPIEQ9UNP9 301 aaKnown RBP9.21□□□□□ -0.94
SIX4-202ENST00000554079 ZNF451Q9Y4E5 1061 aa9.21□□□□□ -0.94
SIX4-202ENST00000554079 A0A0G2JPF8 293 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 HYKKA2RU49 373 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 ARGFXA6NJG6 315 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 ISM1B1AKI9 464 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 HNRNPCL3B7ZW38 293 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 M0QYV0 167 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 GFRA2O00451 464 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 SIGLEC5O15389 551 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 CCNB2O95067 398 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 SCG5P05408 212 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 HNRNPCL4P0DMR1 293 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 CYP2B6P20813 491 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 SLC6A1P30531 599 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 DNAJA1P31689 397 aaKnown RBP9.2□□□□□ -0.94
SIX4-202ENST00000554079 KCNJ3P48549 501 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 PXNP49023 591 aaPredicted RBP9.2□□□□□ -0.94
SIX4-202ENST00000554079 VSX2P58304 361 aaPredicted RBP9.2□□□□□ -0.94
SIX4-202ENST00000554079 SOX4Q06945 474 aaPredicted RBP9.2□□□□□ -0.94
SIX4-202ENST00000554079 SIGLEC14Q08ET2 396 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 DUSP4Q13115 394 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 HNRNPA0Q13151 305 aaKnown RBP9.2□□□□□ -0.94
SIX4-202ENST00000554079 PICALMQ13492 652 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 CAMK2GQ13555 558 aaPredicted RBP9.2□□□□□ -0.94
SIX4-202ENST00000554079 PUM1Q14671 1186 aaKnown RBP eCLIP9.2□□□□□ -0.94
SIX4-202ENST00000554079 P2RY14Q15391 338 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 MED22Q15528 200 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 C21orf62-AS1Q17RA5 79 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 XKR7Q5GH72 579 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 CELF3Q5SZQ8 465 aaKnown RBP9.2□□□□□ -0.94
SIX4-202ENST00000554079 OR6B2Q6IFH4 312 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 RBMS3Q6XE24 437 aaKnown RBP9.2□□□□□ -0.94
SIX4-202ENST00000554079 MIB1Q86YT6 1006 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 IL17RCQ8NAC3 791 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 CAMKVQ8NCB2 501 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 IPMKQ8NFU5 416 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 KIF12Q96FN5 646 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 PYURFQ96I23 114 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 SFXN2Q96NB2 322 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 BBS4Q96RK4 519 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 TMEM209Q96SK2 561 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 GKN1Q9NS71 199 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 SPHK1Q9NYA1 384 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 ZNF226Q9NYT6 803 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 SEC14L4Q9UDX3 406 aa9.2□□□□□ -0.94
SIX4-202ENST00000554079 CFAP20Q9Y6A4 193 aaKnown RBP9.2□□□□□ -0.94
SIX4-202ENST00000554079 A0A1B0GTL3 188 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 LRRC14BA6NHZ5 514 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 ZNF729A6NN14 1252 aaPredicted RBP9.19□□□□□ -0.94
SIX4-202ENST00000554079 RGS11O94810 467 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 ATG12O94817 140 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 CDRT1O95170 752 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 RASGRP1O95267 797 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 WISP3O95389 354 aaPredicted RBP9.19□□□□□ -0.94
SIX4-202ENST00000554079 IL1AP01583 271 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 ZNF806P0C7X5 589 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 SULT1A3P0DMM9 295 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 SULT1A4P0DMN0 295 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 CKMT1AP12532 417 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 ITGB5P18084 799 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 RAB3BP20337 219 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 ACADLP28330 430 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 CALCRP30988 508 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 PRMT2P55345 433 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 HSD17B7P56937 341 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 TGFB2P61812 414 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 GTF2H3Q13889 308 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 CCINQ13939 588 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 LRRC32Q14392 662 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 TRAM2Q15035 370 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 SLC14A2Q15849 920 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 PCID2Q5JVF3 399 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 PID1Q7Z2X4 250 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 C2CD4AQ8NCU7 369 aaPredicted RBP9.19□□□□□ -0.94
SIX4-202ENST00000554079 KHSRPQ92945 711 aaKnown RBP eCLIP9.19□□□□□ -0.94
SIX4-202ENST00000554079 NSUN5Q96P11 429 aaKnown RBP9.19□□□□□ -0.94
SIX4-202ENST00000554079 ERMAPQ96PL5 475 aaPredicted RBP9.19□□□□□ -0.94
SIX4-202ENST00000554079 DMRTA2Q96SC8 542 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 PKMYT1Q99640 499 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 APOL2Q9BQE5 337 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 ARHGAP39Q9C0H5 1083 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 BTBD1Q9H0C5 482 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms