RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 NXPE4Q6UWF7 544 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 LCTLQ6UWM7 567 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 Q6ZNX1 250 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 SLC16A12Q6ZSM3 486 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 TRAPPC5Q8IUR0 188 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 ETFBKMTQ8IXQ9 262 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 LRRC56Q8IYG6 542 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-205ENST00000553474 KRT78Q8N1N4 520 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 RAB7BQ96AH8 199 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 RAD51AP1Q96B01 352 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 PPCDCQ96CD2 204 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 PITHD1Q9GZP4 211 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-205ENST00000553474 RUBCNLQ9H714 662 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 PAK1IP1Q9NWT1 392 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-205ENST00000553474 FAM8A1Q9UBU6 413 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 ICKQ9UPZ9 632 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 HEMK1Q9Y5R4 338 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-205ENST00000553474 RGS10O43665 173 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 TBX19O60806 448 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 BCAS1O75363 584 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-205ENST00000553474 SEMA3DO95025 777 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 NFATC1O95644 943 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 RPN2P04844 631 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 HTR1BP28222 390 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 ACADLP28330 430 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 ST13P50502 369 aaKnown RBP12.38□□□□□ -0.43
SHMT2-205ENST00000553474 MVDP53602 400 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 GP2P55259 537 aaKnown RBP12.38□□□□□ -0.43
SHMT2-205ENST00000553474 BNIP3Q12983 259 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 GAB1Q13480 694 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 SIM2Q14190 667 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-205ENST00000553474 NPTX1Q15818 432 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 CTF1Q16619 201 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 TMEM52BQ4KMG9 183 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 IFI44LQ53G44 452 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 GCNT6Q5T4J0 391 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 ANKRD34AQ69YU3 496 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 FAM71E1Q6IPT2 247 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 GPR153Q6NV75 609 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 TMC5Q6UXY8 1006 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 ERN2Q76MJ5 926 aaKnown RBP12.38□□□□□ -0.43
SHMT2-205ENST00000553474 GALNT5Q7Z7M9 940 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 DSG4Q86SJ6 1040 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 LILRA3Q8N6C8 439 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-205ENST00000553474 SMYD1Q8NB12 490 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 CNIH3Q8TBE1 160 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 S100ZQ8WXG8 99 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 VMP1Q96GC9 406 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 TPD52L3Q96J77 140 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 DPH2Q9BQC3 489 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-205ENST00000553474 PSD2Q9BQI7 771 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 WRAP53Q9BUR4 548 aaKnown RBP12.38□□□□□ -0.43
SHMT2-205ENST00000553474 CCDC90BQ9GZT6 254 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 LTB4R2Q9NPC1 389 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 PLCXD1Q9NUJ7 323 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 FAIMQ9NVQ4 179 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 TAS2R9Q9NYW1 312 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 DNMT3AQ9Y6K1 912 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-205ENST00000553474 MUC22E2RYF6 1773 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-205ENST00000553474 SPINT1O43278 529 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 MITFO75030 526 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-205ENST00000553474 PAPLNO95428 1278 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 ADRB3P13945 408 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 ZNF8P17098 575 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-205ENST00000553474 CD247P20963 164 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 KELP23276 732 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 CXCR2P25025 360 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 GRK3P35626 688 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 CRATP43155 626 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 SERPINB10P48595 397 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 BMXP51813 675 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 CRYBA2P53672 197 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 HBA1P69905 142 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 OCA2Q04671 838 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 CYP2A13Q16696 494 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 CRB2Q5IJ48 1285 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 C9orf64Q5T6V5 341 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 RAET1GQ6H3X3 334 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 ARMCX6Q7L4S7 300 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 TRMT11Q7Z4G4 463 aaKnown RBP12.38□□□□□ -0.43
SHMT2-205ENST00000553474 GRASPQ7Z6J2 395 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-205ENST00000553474 NAGSQ8N159 534 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 ZNF540Q8NDQ6 660 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 GPR156Q8NFN8 814 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 OR10Q1Q8NGQ4 319 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 GIPC3Q8TF64 312 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 C16orf78Q8WTQ4 265 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 TANKQ92844 425 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 ZNF764Q96H86 408 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-205ENST00000553474 PLEKHA8Q96JA3 519 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 ZSWIM3Q96MP5 696 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 CSF3RQ99062 836 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 SLC35A5Q9BS91 424 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 DGCR6LQ9BY27 220 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 WDR12Q9GZL7 423 aaKnown RBP12.38□□□□□ -0.43
SHMT2-205ENST00000553474 PCBD2Q9H0N5 130 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 OR2AG1Q9H205 316 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 SFXN1Q9H9B4 322 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 PRM3Q9NNZ6 103 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 DYRK4Q9NR20 520 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms