RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 ZNF732B4DXR9 585 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 TULP2O00295 520 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 LANCL1O43813 399 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 DFFBO76075 338 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 MT-ND2P03891 347 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 ATP1B1P05026 303 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 SERPINF2P08697 491 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 TSPY4P0CV99 314 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 TSPY10P0CW01 314 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 TPBGLP0DKB5 382 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 LIFP15018 202 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 ANPEPP15144 967 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 PKLRP30613 574 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 HOXA1P49639 335 aaPredicted RBP3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 CCL11P51671 97 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 OR1D5P58170 312 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 HERV-K104P63124 156 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 SPHARQ15513 63 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 TEX35Q5T0J7 233 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 NKAIN2Q5VXU1 208 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 ZNF776Q68DI1 518 aaPredicted RBP3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 OR4C11Q6IEV9 310 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 ZNF549Q6P9A3 640 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 KDELC1Q6UW63 502 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 FAM159AQ6UWV7 190 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 UNQ6126/PRO20091Q6UXV3 157 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 TMEM26Q6ZUK4 368 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 ZNF444Q8N0Y2 327 aaPredicted RBP3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 FBXL14Q8N1E6 418 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 ZNF843Q8N446 348 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 DNAJC22Q8N4W6 341 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 IQCF1Q8N6M8 205 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 GBP7Q8N8V2 638 aaPredicted RBP3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 RNF149Q8NC42 400 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 LEMD2Q8NC56 503 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 METTL21AQ8WXB1 218 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 N4BP2L2Q92802 583 aaPredicted RBP3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 NXPE2Q96DL1 559 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 CCM2Q9BSQ5 444 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 THAP2Q9H0W7 228 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 GANQ9H2C0 597 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 EGLN3Q9H6Z9 239 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 EXOC1Q9NV70 894 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 TMOD3Q9NYL9 352 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 MAN1B1Q9UKM7 699 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 CKAP5Q14008 2032 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 ZMYM6O95789 1325 aa3.64□□□□□ -1.83
LSM6P2-201ENST00000552208 RAD54L2Q9Y4B4 1467 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 SYNJ2BP-COX16A0A087WUM0 186 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 CCDC162PA2VCL2 907 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 FPGTO14772 594 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 GLRA3O75311 464 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 GMNNO75496 209 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 SPAG6O75602 509 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 CDK2AP2O75956 126 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 ZBTB11O95625 1053 aaPredicted RBP3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 APBB3O95704 486 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 TXNDC12O95881 172 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 TSHBP01222 138 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 SFTPBP07988 381 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 CT45A8P0DMV1 189 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 CT45A9P0DMV2 189 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 IGHV4-38-2P0DP08 117 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 FBLP22087 321 aaKnown RBP3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 MARCKSP29966 332 aaPredicted RBP3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 HSPA1LP34931 641 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 SOX6P35712 828 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 IFNAR2P48551 515 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 CCR4P51679 360 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 ZNF132P52740 706 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 C21orf58P58505 322 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 HERV-K104P61576 105 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 LTBQ06643 244 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 MFGE8Q08431 387 aaPredicted RBP3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 ILF3Q12906 894 aaKnown RBP eCLIP3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 SRSF9Q13242 221 aaKnown RBP eCLIP3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 SQLEQ14534 574 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 KRT31Q15323 416 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 CT45A2Q5DJT8 189 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 PDSS1Q5T2R2 415 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 PLPP4Q5VZY2 271 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 SLC27A4Q6P1M0 643 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 TRIM65Q6PJ69 517 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 ARSKQ6UWY0 536 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 CEACAM20Q6UY09 585 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 CDHR3Q6ZTQ4 885 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 CREB3L2Q70SY1 520 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 C1QL2Q7Z5L3 287 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 ZNF575Q86XF7 245 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 ZNF573Q86YE8 665 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 GPC2Q8N158 579 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 SLC43A2Q8N370 569 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 BCORP1Q8N888 145 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 ZNF383Q8NA42 475 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 OR7A2PQ8NGA2 310 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 OR2T34Q8NGX1 318 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 U2AF1L4Q8WU68 220 aaKnown RBP3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 SLC5A11Q8WWX8 675 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 ARHGAP45Q92619 1136 aa3.63□□□□□ -1.83
LSM6P2-201ENST00000552208 P3H4Q92791 437 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms