RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 CA9Q16790 459 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 TTC31Q49AM3 519 aaPredicted RBP4.94□□□□□ -1.62
CPSF6-206ENST00000550987 TCEAL5Q5H9L2 206 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 CORO6Q6QEF8 472 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 SATL1Q86VE3 508 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 ERO1BQ86YB8 467 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 TMEM139Q8IV31 216 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 RASGEF1AQ8N9B8 481 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 CCDC63Q8NA47 563 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 NOA1Q8NC60 698 aaKnown RBP4.94□□□□□ -1.62
CPSF6-206ENST00000550987 KIAA0895Q8NCT3 520 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 NPEPL1Q8NDH3 523 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 TRIM44Q96DX7 344 aaPredicted RBP4.94□□□□□ -1.62
CPSF6-206ENST00000550987 CDKN2AIPNLQ96HQ2 116 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 RPGRIP1Q96KN7 1286 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 RUNDC3BQ96NL0 473 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 TMEM237Q96Q45 408 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 MYADMQ96S97 322 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 PKP4Q99569 1192 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 RTP3Q9BQQ7 232 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 URM1Q9BTM9 101 aaKnown RBP4.94□□□□□ -1.62
CPSF6-206ENST00000550987 POLR3CQ9BUI4 534 aaPredicted RBP4.94□□□□□ -1.62
CPSF6-206ENST00000550987 TMPRSS5Q9H3S3 457 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 FKRPQ9H9S5 495 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 PDRG1Q9NUG6 133 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 PKD2L2Q9NZM6 624 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 HOOK1Q9UJC3 728 aaKnown RBP4.94□□□□□ -1.62
CPSF6-206ENST00000550987 KLK13Q9UKR3 277 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 RUVBL2Q9Y230 463 aaKnown RBP4.94□□□□□ -1.62
CPSF6-206ENST00000550987 ARID1BQ8NFD5 2236 aaPredicted RBP4.94□□□□□ -1.62
CPSF6-206ENST00000550987 ABCC4O15439 1325 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 CABIN1Q9Y6J0 2220 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 MYMKA6NI61 221 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 CD8B2A6NJW9 211 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 E9PI62 339 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 PLOD2O00469 737 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 RNASEH1O60930 286 aaKnown RBP4.93□□□□□ -1.62
CPSF6-206ENST00000550987 HMMRO75330 724 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 B3GALNT1O75752 331 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 AKAP3O75969 853 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 ACAA1P09110 424 aaPredicted RBP4.93□□□□□ -1.62
CPSF6-206ENST00000550987 SBK2P0C263 348 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 CDH1P12830 882 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 GAP43P17677 238 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 VCLP18206 1134 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 CDX1P47902 265 aaPredicted RBP4.93□□□□□ -1.62
CPSF6-206ENST00000550987 BPIFB3P59826 476 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 GFPT1Q06210 699 aaPredicted RBP4.93□□□□□ -1.62
CPSF6-206ENST00000550987 MFAP5Q13361 173 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 RBBP7Q16576 425 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 SGCBQ16585 318 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 PHKG1Q16816 387 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 UGT3A2Q3SY77 523 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 PHLDA2Q53GA4 152 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 CYP4A22Q5TCH4 519 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 LRRC38Q5VT99 294 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 PODNL1Q6PEZ8 512 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 ZNF517Q6ZMY9 492 aaPredicted RBP4.93□□□□□ -1.62
CPSF6-206ENST00000550987 PIWIL4Q7Z3Z4 852 aaKnown RBP4.93□□□□□ -1.62
CPSF6-206ENST00000550987 ANKRD46Q86W74 232 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 ZNF619Q8N2I2 560 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 OTUD6BQ8N6M0 293 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 SEPT1Q8WYJ6 367 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 CENPTQ96BT3 561 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 PYCR2Q96C36 320 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 AP2M1Q96CW1 435 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 FAM71F1Q96KD3 344 aaPredicted RBP4.93□□□□□ -1.62
CPSF6-206ENST00000550987 PI4K2AQ9BTU6 479 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 OSBPL8Q9BZF1 889 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 TM6SF1Q9BZW5 370 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 TRIM4Q9C037 500 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 CSTL1Q9H114 145 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 CUEDC2Q9H467 287 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 RNPEPL1Q9HAU8 725 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 BIRC6Q9NR09 4857 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 SLCO1C1Q9NYB5 712 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 DAPK2Q9UIK4 370 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 PA2G4Q9UQ80 394 aaKnown RBP4.93□□□□□ -1.62
CPSF6-206ENST00000550987 NIP7Q9Y221 180 aaKnown RBP eCLIP4.93□□□□□ -1.62
CPSF6-206ENST00000550987 WDR83OSQ9Y284 106 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 DLGAP4Q9Y2H0 992 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 PCLOQ9Y6V0 5065 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 MAPK8IP3Q9UPT6 1336 aa4.93□□□□□ -1.62
CPSF6-206ENST00000550987 RFX7Q2KHR2 1363 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 SVILO95425 2214 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 PTPRSQ13332 1948 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 UBR2Q8IWV8 1755 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 CSMD2Q7Z408 3487 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 A0A1W2PPK0 400 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 KRT87PA6NCN2 255 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 ANKRD61A6NGH8 418 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 ZNF587BE7ETH6 402 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 INO80B-WBP1J3KQ70 363 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 CACNB4O00305 520 aaPredicted RBP4.92□□□□□ -1.62
CPSF6-206ENST00000550987 ATP9AO75110 1047 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 NME6O75414 186 aaPredicted RBP4.92□□□□□ -1.62
CPSF6-206ENST00000550987 ATP6AP2O75787 350 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 REC8O95072 547 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 FCGR1AP12314 374 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 ZNF12P17014 697 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms