RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 SYN3O14994 580 aa22.21■■□□□ 1.15
NPAS3-206ENST00000548645 PRAMEF4O60810 478 aa22.21■■□□□ 1.15
NPAS3-206ENST00000548645 ALPPP05187 535 aa22.21■■□□□ 1.15
NPAS3-206ENST00000548645 BPIP17213 487 aa22.21■■□□□ 1.15
NPAS3-206ENST00000548645 HOXD11P31277 338 aaPredicted RBP22.21■■□□□ 1.15
NPAS3-206ENST00000548645 DOC2BQ14184 412 aa22.21■■□□□ 1.15
NPAS3-206ENST00000548645 PRAMEF9Q5VWM5 478 aa22.21■■□□□ 1.15
NPAS3-206ENST00000548645 SIGIRRQ6IA17 410 aa22.21■■□□□ 1.15
NPAS3-206ENST00000548645 CXorf57Q6NSI4 855 aaKnown RBP22.21■■□□□ 1.15
NPAS3-206ENST00000548645 CXCL17Q6UXB2 119 aa22.21■■□□□ 1.15
NPAS3-206ENST00000548645 FAM181AQ8N9Y4 354 aa22.21■■□□□ 1.15
NPAS3-206ENST00000548645 SKA2Q8WVK7 121 aaPredicted RBP22.21■■□□□ 1.15
NPAS3-206ENST00000548645 TMEM245Q9H330 911 aa22.21■■□□□ 1.15
NPAS3-206ENST00000548645 GIMAP4Q9NUV9 329 aa22.21■■□□□ 1.15
NPAS3-206ENST00000548645 CRYZL1O95825 349 aa22.2■■□□□ 1.15
NPAS3-206ENST00000548645 RPLP2P05387 115 aaKnown RBP22.2■■□□□ 1.15
NPAS3-206ENST00000548645 C8GP07360 202 aa22.2■■□□□ 1.15
NPAS3-206ENST00000548645 CSTF2P33240 577 aaKnown RBP eCLIP22.2■■□□□ 1.15
NPAS3-206ENST00000548645 NSG1P42857 185 aa22.2■■□□□ 1.15
NPAS3-206ENST00000548645 DSC1Q08554 894 aa22.2■■□□□ 1.15
NPAS3-206ENST00000548645 XKRXQ6PP77 449 aa22.2■■□□□ 1.15
NPAS3-206ENST00000548645 PEX5LQ8IYB4 626 aa22.2■■□□□ 1.15
NPAS3-206ENST00000548645 SUN5Q8TC36 379 aa22.2■■□□□ 1.15
NPAS3-206ENST00000548645 STUB1Q9UNE7 303 aa22.2■■□□□ 1.15
NPAS3-206ENST00000548645 OR6C75A6NL08 312 aa22.2■■□□□ 1.14
NPAS3-206ENST00000548645 ZAR1LA6NP61 321 aa22.2■■□□□ 1.14
NPAS3-206ENST00000548645 ERVH48-1M5A8F1 160 aa22.2■■□□□ 1.14
NPAS3-206ENST00000548645 CLDN7O95471 211 aa22.2■■□□□ 1.14
NPAS3-206ENST00000548645 ATF6P18850 670 aa22.2■■□□□ 1.14
NPAS3-206ENST00000548645 ERP29P30040 261 aaKnown RBP22.2■■□□□ 1.14
NPAS3-206ENST00000548645 SOX3P41225 446 aa22.2■■□□□ 1.14
NPAS3-206ENST00000548645 CRATP43155 626 aa22.2■■□□□ 1.14
NPAS3-206ENST00000548645 CD83Q01151 205 aa22.2■■□□□ 1.14
NPAS3-206ENST00000548645 ZNF33BQ06732 778 aa22.2■■□□□ 1.14
NPAS3-206ENST00000548645 GAB1Q13480 694 aa22.2■■□□□ 1.14
NPAS3-206ENST00000548645 ELOAQ14241 798 aaKnown RBP22.2■■□□□ 1.14
NPAS3-206ENST00000548645 RGMBQ6NW40 437 aa22.2■■□□□ 1.14
NPAS3-206ENST00000548645 TCF25Q9BQ70 676 aa22.2■■□□□ 1.14
NPAS3-206ENST00000548645 TTLL2Q9BWV7 592 aa22.2■■□□□ 1.14
NPAS3-206ENST00000548645 CRISPLD1Q9H336 500 aa22.2■■□□□ 1.14
NPAS3-206ENST00000548645 RNF121Q9H920 327 aa22.2■■□□□ 1.14
NPAS3-206ENST00000548645 ZNF282Q9UDV7 671 aaPredicted RBP22.2■■□□□ 1.14
NPAS3-206ENST00000548645 MAPRE3Q9UPY8 281 aa22.2■■□□□ 1.14
NPAS3-206ENST00000548645 FCF1Q9Y324 198 aaKnown RBP22.2■■□□□ 1.14
NPAS3-206ENST00000548645 TRPM7Q96QT4 1865 aa22.2■■□□□ 1.14
NPAS3-206ENST00000548645 GABRR3A8MPY1 467 aa22.2■■□□□ 1.14
NPAS3-206ENST00000548645 B4DXG7 233 aa22.2■■□□□ 1.14
NPAS3-206ENST00000548645 PCDH17O14917 1159 aa22.2■■□□□ 1.14
NPAS3-206ENST00000548645 ITPKAP23677 461 aa22.2■■□□□ 1.14
NPAS3-206ENST00000548645 SPAM1P38567 509 aa22.2■■□□□ 1.14
NPAS3-206ENST00000548645 LARS2Q15031 903 aaKnown RBP22.2■■□□□ 1.14
NPAS3-206ENST00000548645 GLYR1Q49A26 553 aaPredicted RBP22.2■■□□□ 1.14
NPAS3-206ENST00000548645 ANGPTL8Q6UXH0 198 aa22.2■■□□□ 1.14
NPAS3-206ENST00000548645 VPS35Q96QK1 796 aa22.2■■□□□ 1.14
NPAS3-206ENST00000548645 FTSJ1Q9UET6 329 aa22.2■■□□□ 1.14
NPAS3-206ENST00000548645 MTMR11A4FU01 709 aa22.19■■□□□ 1.14
NPAS3-206ENST00000548645 EIF3FO00303 357 aaPredicted RBP22.19■■□□□ 1.14
NPAS3-206ENST00000548645 CNR2P34972 360 aa22.19■■□□□ 1.14
NPAS3-206ENST00000548645 CRYBB2P43320 205 aa22.19■■□□□ 1.14
NPAS3-206ENST00000548645 ASMTP46597 345 aa22.19■■□□□ 1.14
NPAS3-206ENST00000548645 CRISP1P54107 249 aa22.19■■□□□ 1.14
NPAS3-206ENST00000548645 AP1S1P61966 158 aa22.19■■□□□ 1.14
NPAS3-206ENST00000548645 SPHARQ15513 63 aa22.19■■□□□ 1.14
NPAS3-206ENST00000548645 SLC35F1Q5T1Q4 408 aa22.19■■□□□ 1.14
NPAS3-206ENST00000548645 PDZK1Q5T2W1 519 aa22.19■■□□□ 1.14
NPAS3-206ENST00000548645 ZNF648Q5T619 568 aaPredicted RBP22.19■■□□□ 1.14
NPAS3-206ENST00000548645 RFPL4BQ6ZWI9 263 aa22.19■■□□□ 1.14
NPAS3-206ENST00000548645 FAM46DQ8NEK8 389 aa22.19■■□□□ 1.14
NPAS3-206ENST00000548645 UBASH3BQ8TF42 649 aa22.19■■□□□ 1.14
NPAS3-206ENST00000548645 PIP5K1AQ99755 562 aa22.19■■□□□ 1.14
NPAS3-206ENST00000548645 C11orf54Q9H0W9 315 aaPredicted RBP22.19■■□□□ 1.14
NPAS3-206ENST00000548645 ACER3Q9NUN7 267 aa22.19■■□□□ 1.14
NPAS3-206ENST00000548645 LSM2Q9Y333 95 aaKnown RBP22.19■■□□□ 1.14
NPAS3-206ENST00000548645 CBLP22681 906 aa22.19■■□□□ 1.14
NPAS3-206ENST00000548645 FRMPD2BQ6IN97 320 aa22.19■■□□□ 1.14
NPAS3-206ENST00000548645 GDPD1Q8N9F7 314 aa22.19■■□□□ 1.14
NPAS3-206ENST00000548645 BEX2Q9BXY8 128 aa22.19■■□□□ 1.14
NPAS3-206ENST00000548645 CWH43Q9H720 699 aa22.19■■□□□ 1.14
NPAS3-206ENST00000548645 SSR3Q9UNL2 185 aa22.19■■□□□ 1.14
NPAS3-206ENST00000548645 CYP17A1P05093 508 aa22.18■■□□□ 1.14
NPAS3-206ENST00000548645 CCR7P32248 378 aa22.18■■□□□ 1.14
NPAS3-206ENST00000548645 IL12RB1P42701 662 aa22.18■■□□□ 1.14
NPAS3-206ENST00000548645 IRF8Q02556 426 aa22.18■■□□□ 1.14
NPAS3-206ENST00000548645 OR9Q1Q8NGQ5 310 aa22.18■■□□□ 1.14
NPAS3-206ENST00000548645 ZFAND1Q8TCF1 268 aa22.18■■□□□ 1.14
NPAS3-206ENST00000548645 OR6C70A6NIJ9 312 aa22.18■■□□□ 1.14
NPAS3-206ENST00000548645 ARHGEF9O43307 516 aa22.18■■□□□ 1.14
NPAS3-206ENST00000548645 MYCP01106 439 aaPredicted RBP22.18■■□□□ 1.14
NPAS3-206ENST00000548645 KLKB1P03952 638 aa22.18■■□□□ 1.14
NPAS3-206ENST00000548645 ITGB7P26010 798 aa22.18■■□□□ 1.14
NPAS3-206ENST00000548645 HTR2BP41595 481 aa22.18■■□□□ 1.14
NPAS3-206ENST00000548645 HMGA2P52926 109 aa22.18■■□□□ 1.14
NPAS3-206ENST00000548645 MEDAGQ5VYS4 303 aa22.18■■□□□ 1.14
NPAS3-206ENST00000548645 SYCE2Q6PIF2 218 aa22.18■■□□□ 1.14
NPAS3-206ENST00000548645 TCTE3Q8IZS6 198 aa22.18■■□□□ 1.14
NPAS3-206ENST00000548645 SLC34A3Q8N130 599 aa22.18■■□□□ 1.14
NPAS3-206ENST00000548645 AQP11Q8NBQ7 271 aa22.18■■□□□ 1.14
NPAS3-206ENST00000548645 OR4A15Q8NGL6 344 aa22.18■■□□□ 1.14
NPAS3-206ENST00000548645 NMRK2Q9NPI5 230 aa22.18■■□□□ 1.14
NPAS3-206ENST00000548645 HYKKA2RU49 373 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms