RNA–Protein interactions for RNA: ENST00000548283.6

TMEM116-206, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 3,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-206ENST00000548283 SOHLH2Q9NX45 425 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 PRPF19Q9UMS4 504 aaKnown RBP6.95□□□□□ -1.3
TMEM116-206ENST00000548283 NOX1Q9Y5S8 564 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 HS3ST3A1Q9Y663 406 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 NUP210LQ5VU65 1888 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 TRBV5-3A0A0A0MS03 114 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 A0A1W2PQ09 198 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 TEX46H3BTG2 121 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 RAD51BO15315 384 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 CCNYL3P0C7X3 344 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 ARAFP10398 606 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 TDGF1P13385 188 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 RCVRNP35243 200 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 PNLIPRP1P54315 467 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 ERVPABLB-1P60509 514 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 CNTN1Q12860 1018 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 KLF10Q13118 480 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 CFAP157Q5JU67 520 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 C6orf10Q5SRN2 563 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 Q6ZSR9 355 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 GPSM1Q86YR5 675 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 VRK3Q8IV63 474 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 FUNDC1Q8IVP5 155 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 CISD2Q8N5K1 135 aaKnown RBP6.95□□□□□ -1.3
TMEM116-206ENST00000548283 PTP4A1Q93096 173 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 ROPN1LQ96C74 230 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 ISOC1Q96CN7 298 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 MOCOSQ96EN8 888 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 C3orf30Q96M34 536 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 HS6ST2Q96MM7 605 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 RIOK2Q9BVS4 552 aaKnown RBP6.95□□□□□ -1.3
TMEM116-206ENST00000548283 RPF2Q9H7B2 306 aaKnown RBP6.95□□□□□ -1.3
TMEM116-206ENST00000548283 ZMAT3Q9HA38 289 aaKnown RBP6.95□□□□□ -1.3
TMEM116-206ENST00000548283 PRDM9Q9NQV7 894 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 GTSE1Q9NYZ3 720 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 BAG5Q9UL15 447 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 MMP17Q9ULZ9 603 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 FNDC3AQ9Y2H6 1198 aaKnown RBP6.95□□□□□ -1.3
TMEM116-206ENST00000548283 COPG1Q9Y678 874 aaKnown RBP6.95□□□□□ -1.3
TMEM116-206ENST00000548283 A0A0U1RQS6 177 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 FOXE1O00358 373 aaPredicted RBP6.95□□□□□ -1.3
TMEM116-206ENST00000548283 UBXN7O94888 489 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 KLHL18O94889 574 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 C1orf105O95561 183 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 IFI6P09912 130 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 GSTM5P46439 218 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 RGS4P49798 205 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 ADPRHP54922 357 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 ST8SIA6P61647 398 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 EMX2Q04743 252 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 TMEM115Q12893 351 aaPredicted RBP6.95□□□□□ -1.3
TMEM116-206ENST00000548283 CSTF3Q12996 717 aaKnown RBP6.95□□□□□ -1.3
TMEM116-206ENST00000548283 RCAN2Q14206 197 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 CCDC6Q16204 474 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 PHKG1Q16816 387 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 CEP78Q5JTW2 689 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 C1orf146Q5VVC0 180 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 GALNT18Q6P9A2 607 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 FBXO39Q8N4B4 442 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 PTGR2Q8N8N7 351 aaPredicted RBP6.95□□□□□ -1.3
TMEM116-206ENST00000548283 OR56A4Q8NGH8 313 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 OR6K2Q8NGY2 324 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 OR2T11Q8NH01 316 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 GANCQ8TET4 914 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 SETD7Q8WTS6 366 aaKnown RBP6.95□□□□□ -1.3
TMEM116-206ENST00000548283 C19orf60Q96EN9 201 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 TSNARE1Q96NA8 513 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 ACTL8Q9H568 366 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 SLC32A1Q9H598 525 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 ZDHHC4Q9NPG8 344 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 DECR2Q9NUI1 292 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 CACNA2D2Q9NY47 1150 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 GMPR2Q9P2T1 348 aaKnown RBP6.95□□□□□ -1.3
TMEM116-206ENST00000548283 MARCOQ9UEW3 520 aaPredicted RBP6.95□□□□□ -1.3
TMEM116-206ENST00000548283 PCDH15Q96QU1 1955 aa6.95□□□□□ -1.3
TMEM116-206ENST00000548283 A0A087X0M5 115 aa6.94□□□□□ -1.3
TMEM116-206ENST00000548283 A0A1B0GX30 115 aa6.94□□□□□ -1.3
TMEM116-206ENST00000548283 ASPDHA6ND91 283 aa6.94□□□□□ -1.3
TMEM116-206ENST00000548283 H3BMQ9 156 aa6.94□□□□□ -1.3
TMEM116-206ENST00000548283 AZIN1O14977 448 aa6.94□□□□□ -1.3
TMEM116-206ENST00000548283 GMFGO60234 142 aa6.94□□□□□ -1.3
TMEM116-206ENST00000548283 PRAMEF4O60810 478 aa6.94□□□□□ -1.3
TMEM116-206ENST00000548283 ATG13O75143 517 aa6.94□□□□□ -1.3
TMEM116-206ENST00000548283 DIRAS3O95661 229 aa6.94□□□□□ -1.3
TMEM116-206ENST00000548283 CLPTM1O96005 669 aa6.94□□□□□ -1.3
TMEM116-206ENST00000548283 EEF1DP29692 281 aaKnown RBP6.94□□□□□ -1.3
TMEM116-206ENST00000548283 CCR10P46092 362 aa6.94□□□□□ -1.3
TMEM116-206ENST00000548283 RPS9P46781 194 aaKnown RBP6.94□□□□□ -1.3
TMEM116-206ENST00000548283 ALDH9A1P49189 494 aa6.94□□□□□ -1.3
TMEM116-206ENST00000548283 RPS26P62854 115 aaKnown RBP6.94□□□□□ -1.3
TMEM116-206ENST00000548283 RPS21P63220 83 aaKnown RBP6.94□□□□□ -1.3
TMEM116-206ENST00000548283 CDK3Q00526 305 aa6.94□□□□□ -1.3
TMEM116-206ENST00000548283 MTAPQ13126 283 aa6.94□□□□□ -1.3
TMEM116-206ENST00000548283 DNAL1Q4LDG9 190 aa6.94□□□□□ -1.3
TMEM116-206ENST00000548283 PRAMEF9Q5VWM5 478 aa6.94□□□□□ -1.3
TMEM116-206ENST00000548283 REC114Q7Z4M0 266 aa6.94□□□□□ -1.3
TMEM116-206ENST00000548283 PDZD3Q86UT5 571 aa6.94□□□□□ -1.3
TMEM116-206ENST00000548283 MINDY1Q8N5J2 469 aa6.94□□□□□ -1.3
TMEM116-206ENST00000548283 GLB1L3Q8NCI6 653 aaPredicted RBP6.94□□□□□ -1.3
TMEM116-206ENST00000548283 ZNF671Q8TAW3 534 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms