RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 TRGV8A0A0C4DH27 118 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 A0A1B0GUH1 482 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 NCF1BA6NI72 391 aaPredicted RBP6.3□□□□□ -1.4
SCAF11-211ENST00000547950 A8MUA0 341 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 NCF1CA8MVU1 366 aaPredicted RBP6.3□□□□□ -1.4
SCAF11-211ENST00000547950 MAGEB17A8MXT2 336 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 CCDC188H7C350 402 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 NDC80O14777 642 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 TP73O15350 636 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 PRMT3O60678 531 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 ZG16O60844 167 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 WISP2O76076 250 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 WDR47O94967 919 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 CRYABP02511 175 aaKnown RBP6.3□□□□□ -1.4
SCAF11-211ENST00000547950 FHP07954 510 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 CYC1P08574 325 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 STSP08842 583 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 NCF1P14598 390 aaPredicted RBP6.3□□□□□ -1.4
SCAF11-211ENST00000547950 ZNF37AP17032 561 aaPredicted RBP6.3□□□□□ -1.4
SCAF11-211ENST00000547950 MAOAP21397 527 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 JAK1P23458 1154 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 SSTR1P30872 391 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 AHRP35869 848 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 DCTP40126 519 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 SKP1P63208 163 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 BTN3A2P78410 334 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 PMP22Q01453 160 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 RHAGQ02094 409 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 OC90Q02509 493 aaPredicted RBP6.3□□□□□ -1.4
SCAF11-211ENST00000547950 TUBA3CQ13748 450 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 FRG1Q14331 258 aaKnown RBP6.3□□□□□ -1.4
SCAF11-211ENST00000547950 TSNQ15631 228 aaKnown RBP6.3□□□□□ -1.4
SCAF11-211ENST00000547950 EXT1Q16394 746 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 MEP1AQ16819 746 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 ZNF766Q5HY98 468 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 TOR1AIP1Q5JTV8 583 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 ZNF324BQ6AW86 544 aaPredicted RBP6.3□□□□□ -1.4
SCAF11-211ENST00000547950 SP5Q6BEB4 398 aaPredicted RBP6.3□□□□□ -1.4
SCAF11-211ENST00000547950 H3F3CQ6NXT2 135 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 TUBA3EQ6PEY2 450 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 PAPD4Q6PIY7 484 aaKnown RBP6.3□□□□□ -1.4
SCAF11-211ENST00000547950 ABHD13Q7L211 337 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 TMPRSS11BQ86T26 416 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 CRLF3Q8IUI8 442 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 CEP97Q8IW35 865 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 AFAP1L2Q8N4X5 818 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 SLC5A8Q8N695 610 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 ANKRD53Q8N9V6 530 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 BBOF1Q8ND07 529 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 TRPV3Q8NET8 790 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 DNAJB8Q8NHS0 232 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 M1APQ8TC57 530 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 NT5CQ8TCD5 201 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 CCT6BQ92526 530 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 NR4A3Q92570 626 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 VPS39Q96JC1 886 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 SIGLEC12Q96PQ1 595 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 OR1F2PQ96R84 312 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 LPAR4Q99677 370 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 AIF1LQ9BQI0 150 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 UTP23Q9BRU9 249 aaKnown RBP6.3□□□□□ -1.4
SCAF11-211ENST00000547950 SARGQ9BW04 601 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 HES7Q9BYE0 225 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 RNF32Q9H0A6 362 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 DPH5Q9H2P9 285 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 CDCP1Q9H5V8 836 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 CAB39LQ9H9S4 337 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 MMP25Q9NPA2 562 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 SAYSD1Q9NPB0 183 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 LANCL2Q9NS86 450 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 ABI3Q9P2A4 366 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 SEC14L3Q9UDX4 400 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 SH3BGRL2Q9UJC5 107 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 DOPEY2Q9Y3R5 2298 aa6.3□□□□□ -1.4
SCAF11-211ENST00000547950 RP1L1Q8IWN7 2480 aaPredicted RBP6.3□□□□□ -1.4
SCAF11-211ENST00000547950 A0A0G2JN53 185 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 URADA6NGE7 173 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 GABRR3A8MPY1 467 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 CXorf49A8MYA2 514 aaPredicted RBP6.29□□□□□ -1.4
SCAF11-211ENST00000547950 PSMD12O00232 456 aaPredicted RBP6.29□□□□□ -1.4
SCAF11-211ENST00000547950 PHGDHO43175 533 aaKnown RBP6.29□□□□□ -1.4
SCAF11-211ENST00000547950 SERPINA6P08185 405 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 CCDC166P0CW27 439 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 C1GALT1C1LP0DN25 315 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 GNAZP19086 355 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 EEF1DP29692 281 aaKnown RBP6.29□□□□□ -1.4
SCAF11-211ENST00000547950 HNMTP50135 292 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 TDGF1P3P51864 188 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 SLC26A5P58743 744 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 TAS2R50P59544 299 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 REEP5Q00765 189 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 POU4F1Q01851 419 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 HYAL2Q12891 473 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 CALCOCO2Q13137 446 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 USP10Q14694 798 aaKnown RBP6.29□□□□□ -1.4
SCAF11-211ENST00000547950 OR1C1Q15619 314 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 ZRSR2Q15696 482 aaKnown RBP6.29□□□□□ -1.4
SCAF11-211ENST00000547950 INAQ16352 499 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 MAPKAPK3Q16644 382 aa6.29□□□□□ -1.4
SCAF11-211ENST00000547950 PPP1R3AQ16821 1122 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms