RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 CES4AQ5XG92 561 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 C11orf71Q6IPW1 123 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 IRGCQ6NXR0 463 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 SPSB3Q6PJ21 355 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 SHC4Q6S5L8 630 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 ATRAIDQ6UW56 229 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 ASB18Q6ZVZ8 466 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 CATSPER4Q7RTX7 472 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 PIWIL4Q7Z3Z4 852 aaKnown RBP0.95□□□□□ -2.26
HIF1A-204ENST00000539097 RABEPKQ7Z6M1 372 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 PIGWQ7Z7B1 504 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 TUSC5Q8IXB3 177 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 SLC5A8Q8N695 610 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 LRTM2Q8N967 370 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 BANPQ8N9N5 519 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 CSNK1G2-AS1Q8NCQ2 148 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 NPEPL1Q8NDH3 523 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 OR10G8Q8NGN5 311 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 OR10Q1Q8NGQ4 319 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 SPATA18Q8TC71 538 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 LGALS12Q96DT0 336 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 DTD2Q96FN9 168 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 GDAP1L1Q96MZ0 367 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 RAD9AQ99638 391 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 JPH2Q9BR39 696 aaPredicted RBP0.95□□□□□ -2.26
HIF1A-204ENST00000539097 S1PR5Q9H228 398 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 RIBC2Q9H4K1 309 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 RIOX1Q9H6W3 641 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 CHMP1AQ9HD42 196 aaPredicted RBP0.95□□□□□ -2.26
HIF1A-204ENST00000539097 DNAJC11Q9NVH1 559 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 CNOT2Q9NZN8 540 aaKnown RBP0.95□□□□□ -2.26
HIF1A-204ENST00000539097 OR6C2Q9NZP2 312 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 FZD10Q9ULW2 581 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 GPR132Q9UNW8 380 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 KCNJ14Q9UNX9 436 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 NOSIPQ9Y314 301 aaKnown RBP0.95□□□□□ -2.26
HIF1A-204ENST00000539097 SNX9Q9Y5X1 595 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 CHD1O14646 1710 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP0.95□□□□□ -2.26
HIF1A-204ENST00000539097 MED14O60244 1454 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 SETBP1Q9Y6X0 1596 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 RGS12O14924 1447 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 GIMAP1-GIMAP5A0A087WTJ2 511 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 TRBV5-5A0A0J9YX44 114 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 A0A1W2PRV1 198 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 DNAJC9-AS1A6NH13 148 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 FBLL1A6NHQ2 334 aaKnown RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 M0R296 226 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 CACNB4O00305 520 aaPredicted RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 DCXO43602 365 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 FCGR3BO75015 233 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 SDC3O75056 442 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 SERPINI2O75830 405 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 MOCS3O95396 460 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 GH1P01241 217 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 FCER2P06734 321 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 KRT19P08727 400 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 GOT1P17174 413 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 CDC25AP30304 524 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ZFP36L2P47974 494 aaKnown RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 VEGFCP49767 419 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 MBTD1Q05BQ5 628 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 DLG1Q12959 904 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 GPR50Q13585 617 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 GANABQ14697 944 aaKnown RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 EXT1Q16394 746 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 CA9Q16790 459 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 CCDC92Q53HC0 331 aaPredicted RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 PRAMEF8Q5VWM4 474 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 GALNT17Q6IS24 598 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 FAM159AQ6UWV7 190 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 GSG1LQ6UXU4 331 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 FOXL2NBQ6ZUU3 175 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 RD3Q7Z3Z2 195 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 COX8CQ7Z4L0 72 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ANKRD37Q7Z713 158 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 COMMD2Q86X83 199 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 WDR49Q8IV35 697 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 GPC2Q8N158 579 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 OR5AU1Q8NGC0 362 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 TFB1MQ8WVM0 346 aaKnown RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 SMG7Q92540 1137 aaKnown RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 MTERF3Q96E29 417 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 SEH1LQ96EE3 360 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 GIMAP5Q96F15 307 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ZBED3Q96IU2 234 aaPredicted RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 RBM4Q9BWF3 364 aaKnown RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 MRPL13Q9BYD1 178 aaKnown RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 PKIBQ9C010 78 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 AMBNQ9NP70 447 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 TMEM161AQ9NX61 479 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 VPS54Q9P1Q0 977 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 TUBGCP4Q9UGJ1 667 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 LAMP5Q9UJQ1 280 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 KLK4Q9Y5K2 254 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 R4GN57 208 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 KMT2BQ9UMN6 2715 aaPredicted RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 CFAP65Q6ZU64 1925 aaKnown RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 SCN5AQ14524 2016 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 IGHV4-61A0A0C4DH41 118 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms