RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 LSM2Q9Y333 95 aaKnown RBP16.56■□□□□ 0.24
C2CD3-213ENST00000539061 PCDHB9Q9Y5E1 797 aa16.56■□□□□ 0.24
C2CD3-213ENST00000539061 HYKKA2RU49 373 aa16.56■□□□□ 0.24
C2CD3-213ENST00000539061 UPK3BL1B0FP48 263 aa16.56■□□□□ 0.24
C2CD3-213ENST00000539061 UPK3BL2E5RIL1 263 aa16.56■□□□□ 0.24
C2CD3-213ENST00000539061 ZNF623O75123 536 aa16.56■□□□□ 0.24
C2CD3-213ENST00000539061 OPN1SWP03999 348 aa16.56■□□□□ 0.24
C2CD3-213ENST00000539061 FHP07954 510 aa16.56■□□□□ 0.24
C2CD3-213ENST00000539061 CKMT1AP12532 417 aa16.56■□□□□ 0.24
C2CD3-213ENST00000539061 GPR19Q15760 415 aa16.56■□□□□ 0.24
C2CD3-213ENST00000539061 PAMR1Q6UXH9 720 aa16.56■□□□□ 0.24
C2CD3-213ENST00000539061 CREB3L2Q70SY1 520 aa16.56■□□□□ 0.24
C2CD3-213ENST00000539061 NLRP8Q86W28 1048 aa16.56■□□□□ 0.24
C2CD3-213ENST00000539061 L3MBTL4Q8NA19 623 aa16.56■□□□□ 0.24
C2CD3-213ENST00000539061 TRMT61AQ96FX7 289 aaKnown RBP16.56■□□□□ 0.24
C2CD3-213ENST00000539061 FAM129BQ96TA1 746 aa16.56■□□□□ 0.24
C2CD3-213ENST00000539061 DUSP26Q9BV47 211 aa16.56■□□□□ 0.24
C2CD3-213ENST00000539061 RETREG1Q9H6L5 497 aa16.56■□□□□ 0.24
C2CD3-213ENST00000539061 FLRT1Q9NZU1 646 aa16.56■□□□□ 0.24
C2CD3-213ENST00000539061 KCNN3Q9UGI6 736 aa16.56■□□□□ 0.24
C2CD3-213ENST00000539061 PLXNA3P51805 1871 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 GLTPD2A6NH11 291 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 ZAR1LA6NP61 321 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 PLA2G10O15496 165 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 RHOCP08134 193 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 TSPAN19P0C672 248 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 ITGALP20701 1170 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 HOXC8P31273 242 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 CNR2P34972 360 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 RPS24P62847 133 aaKnown RBP16.55■□□□□ 0.24
C2CD3-213ENST00000539061 HOXC5Q00444 222 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 PYDC2Q56P42 97 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 NCEH1Q6PIU2 408 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 FAM217AQ8IXS0 508 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 SLC34A3Q8N130 599 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 NAGSQ8N159 534 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 UBE2J2Q8N2K1 259 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 OR9Q1Q8NGQ5 310 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 SLC25A46Q96AG3 418 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 MIXL1Q9H2W2 232 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 TEKT2Q9UIF3 430 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 SPEF1Q9Y4P9 236 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 A0A1W2PQL4 384 aaPredicted RBP16.55■□□□□ 0.24
C2CD3-213ENST00000539061 SERTM1A2A2V5 107 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 H3BNC9 293 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 ACSL4O60488 711 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 CSO75390 466 aaKnown RBP16.55■□□□□ 0.24
C2CD3-213ENST00000539061 OR2B3O76000 313 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 CDRT1O95170 752 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 LGI1O95970 557 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 ALAS2P22557 587 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 PRKACBP22694 351 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 MXD1Q05195 221 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 NFATC2Q13469 925 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 TATDN3Q17R31 274 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 ESCO2Q56NI9 601 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 MACC1Q6ZN28 852 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 FAM46DQ8NEK8 389 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 VPS37AQ8NEZ2 397 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 ANKK1Q8NFD2 765 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 CREB3L4Q8TEY5 395 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 MAP6Q96JE9 813 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 MSLNLQ96KJ4 702 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 VPS35Q96QK1 796 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 TRAF4Q9BUZ4 470 aaPredicted RBP16.55■□□□□ 0.24
C2CD3-213ENST00000539061 UCK2Q9BZX2 261 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 THSD1Q9NS62 852 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 FTSJ1Q9UET6 329 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 CHD5Q8TDI0 1954 aa16.55■□□□□ 0.24
C2CD3-213ENST00000539061 C1orf226A1L170 272 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 B8ZZF3 427 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 PDHXO00330 501 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 GAPDHSO14556 408 aaPredicted RBP16.54■□□□□ 0.24
C2CD3-213ENST00000539061 PCDH17O14917 1159 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 GPC1P35052 558 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 GJA5P36382 358 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 CRISP1P54107 249 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 BTBD16Q32M84 506 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 LCN1P1Q5VSP4 162 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 FRMPD2BQ6IN97 320 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 KLHL6Q8WZ60 621 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 KIAA1143Q96AT1 154 aaPredicted RBP16.54■□□□□ 0.24
C2CD3-213ENST00000539061 MCOLN1Q9GZU1 580 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 CCSER2Q9H7U1 834 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 SLC25A19Q9HC21 320 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 NDUFB11Q9NX14 153 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 ING3Q9NXR8 418 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 SH3BP4Q9P0V3 963 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 AFF4Q9UHB7 1163 aaKnown RBP16.54■□□□□ 0.24
C2CD3-213ENST00000539061 CLEC2DQ9UHP7 191 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 BTNL2Q9UIR0 455 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 TMPRSS11EQ9UL52 423 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 PCDH7O60245 1069 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 IL1AP01583 271 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 TRBC1P01850 177 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 ACRV1P26436 265 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 AP2S1P53680 142 aaPredicted RBP16.54■□□□□ 0.24
C2CD3-213ENST00000539061 MEDAGQ5VYS4 303 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 IDO2Q6ZQW0 420 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 TTC9BQ8N6N2 239 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms