RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 STK25O00506 426 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 OR4F21O95013 312 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 PRAMEF12O95522 483 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 EGFRP00533 1210 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 HDCP19113 662 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 PUM1Q14671 1186 aaKnown RBP eCLIP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 NDUFA9Q16795 377 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 PAN3Q58A45 887 aaKnown RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 GTF2IRD2BQ6EKJ0 949 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 TATDN1Q6P1N9 297 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 GTF2IRD2Q86UP8 949 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 OR4M2Q8NGB6 313 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 NWD2Q9ULI1 1742 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 TMEM63AO94886 807 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 OAS1P00973 400 aaKnown RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 TACSTD2P09758 323 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 PROZP22891 400 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 CDH5P33151 784 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 CXCR3P49682 368 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 DSTNP60981 165 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 TPGS1Q6ZTW0 290 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 C17orf64Q86WR6 236 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 ZBTB44Q8NCP5 570 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 FAM46DQ8NEK8 389 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 NDRG1Q92597 394 aaKnown RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 SH3YL1Q96HL8 342 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 KAZALD1Q96I82 304 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 CCM2LQ9NUG4 571 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 TMEM59LQ9UK28 342 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 WASHC1A8K0Z3 465 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 IL3P08700 152 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 VEGFAP15692 232 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 DRD5P21918 477 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 ETV3P41162 512 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 RAB11BQ15907 218 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 TCEANCQ8N8B7 351 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 TRAPPC12Q8WVT3 735 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 SLC45A3Q96JT2 553 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 AGO3Q9H9G7 860 aaKnown RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 VNN3Q9NY84 501 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 SLC27A5Q9Y2P5 690 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 PRAMEF2O60811 474 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 PNPP00491 289 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 ECM1Q16610 540 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 FLAD1Q8NFF5 587 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 SLC35G5Q96KT7 338 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 H7C1Q1 480 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 M0R129 80 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 CAPN5O15484 640 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 TPMTP51580 245 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 HERV-K104P61576 105 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 EN1Q05925 392 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 DUOXA1Q1HG43 343 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 ETFRF1Q6IPR1 90 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 FAM83HQ6ZRV2 1179 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 C4orf19Q8IY42 314 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 ZNF709Q8N972 641 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 NFKBIDQ8NI38 313 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 BTBD1Q9H0C5 482 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 SIRPGQ9P1W8 387 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 AGO1Q9UL18 857 aaKnown RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 PCDHGA6Q9Y5G7 932 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 PTPRJQ12913 1337 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 SLC15A5A6NIM6 579 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 C22orf31O95567 290 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 BPNT1O95861 308 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 SLC26A2P50443 739 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 COQ5Q5HYK3 327 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 ITIH5Q86UX2 942 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 OR4K3Q96R72 315 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 C17orf62Q9BQA9 187 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 MRPS30Q9NP92 439 aaKnown RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 TMEM248Q9NWD8 314 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 ZNF878C9JN71 531 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 B4GAT1O43505 415 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 C9orf64Q5T6V5 341 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 C3orf33Q6P1S2 294 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 NUP54Q7Z3B4 507 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 PNLDC1Q8NA58 520 aaKnown RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 C14orf79Q96F83 325 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 SPACA7Q96KW9 195 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 SENP8Q96LD8 212 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 RDH12Q96NR8 316 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 GON7Q9BXV9 100 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 IMP3Q9NV31 184 aaKnown RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 ZNF70Q9UC06 446 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 HRH3Q9Y5N1 445 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 PREX1Q8TCU6 1659 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 RECQL4O94761 1208 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 FECHP22830 423 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 CHATP28329 748 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 POLR2LP62875 67 aaKnown RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 FAM46CQ5VWP2 391 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 METTL2BQ6P1Q9 378 aaKnown RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 ACOT11Q8WXI4 607 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 MRPS31Q92665 395 aaKnown RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 MASTLQ96GX5 879 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 METTL2AQ96IZ6 378 aaKnown RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 MYOCQ99972 504 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms