RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 GJA3Q9Y6H8 435 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 TRBV5-4A0A0C4DH59 114 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 FABP12A6NFH5 140 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 C2orf81A6NN90 581 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 H3BNC9 293 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 SGK494L7N484 410 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 QSOX1O00391 747 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 PLD2O14939 933 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 INSIG1O15503 277 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 PDPK1O15530 556 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 SUV39H1O43463 412 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 HRO43593 1189 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 FZD6O60353 706 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 PLOD3O60568 738 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 TLR5O60602 858 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 TNFRSF21O75509 655 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 RFPL3O75679 317 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 CDRT1O95170 752 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 CLDN9O95484 217 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 CSF2P04141 144 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 TPOP07202 933 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 HSMCR30P0CW71 290 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 PSKH1P11801 424 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 COL6A1P12109 1028 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 CKMT1AP12532 417 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 HLA-EP13747 358 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 TYMPP19971 482 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 PRPS1L1P21108 318 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 PPIBP23284 216 aaKnown RBP6.65□□□□□ -1.34
CPSF7-215ENST00000536145 HLA-FP30511 346 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 HOXC8P31273 242 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 CNR2P34972 360 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 KIR3DL1P43629 444 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 XCR1P46094 333 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 BRCC3P46736 316 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 IDH2P48735 452 aaKnown RBP6.65□□□□□ -1.34
CPSF7-215ENST00000536145 TUFMP49411 452 aaKnown RBP6.65□□□□□ -1.34
CPSF7-215ENST00000536145 MAN2A2P49641 1150 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 AGFG1P52594 562 aaKnown RBP6.65□□□□□ -1.34
CPSF7-215ENST00000536145 CRISP1P54107 249 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 PER3P56645 1201 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 RAB25P57735 213 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 SNRPD2P62316 118 aaKnown RBP6.65□□□□□ -1.34
CPSF7-215ENST00000536145 SELENOWP63302 87 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 PURAQ00577 322 aaKnown RBP6.65□□□□□ -1.34
CPSF7-215ENST00000536145 CACNG1Q06432 222 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 ZNF33BQ06732 778 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 SMARCB1Q12824 385 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 MAB21L1Q13394 359 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 DSC3Q14574 896 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 PTGES3Q15185 160 aaKnown RBP6.65□□□□□ -1.34
CPSF7-215ENST00000536145 SPHARQ15513 63 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 MED22Q15528 200 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 OCLNQ16625 522 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 TRIM60Q495X7 471 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 IFI44LQ53G44 452 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 GPRC6AQ5T6X5 926 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 ZBTB37Q5TC79 503 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 LCN1P1Q5VSP4 162 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 FAAH2Q6GMR7 532 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 FAM122CQ6P4D5 195 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 TMEM65Q6PI78 240 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 KLHL17Q6TDP4 642 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 FAM131AQ6UXB0 335 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 MON1AQ86VX9 555 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 CIR1Q86X95 450 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-215ENST00000536145 SLC44A2Q8IWA5 706 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-215ENST00000536145 GPALPP1Q8IXQ4 340 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 CLECL1Q8IZS7 167 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 TMEM145Q8NBT3 493 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 KLHDC9Q8NEP7 349 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 LPCAT1Q8NF37 534 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 PROKR2Q8NFJ6 384 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 OR6J1Q8NGC5 347 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 LHFPL5Q8TAF8 219 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 LRRC20Q8TCA0 184 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 UPRTQ96BW1 309 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 C11orf24Q96F05 449 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-215ENST00000536145 NECTIN4Q96NY8 510 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 QRFPRQ96P65 431 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 FAM193BQ96PV7 902 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-215ENST00000536145 PAAF1Q9BRP4 392 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 TMEM43Q9BTV4 400 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 RETREG1Q9H6L5 497 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 LIN7BQ9HAP6 207 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 ISYNA1Q9NPH2 558 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 PAK6Q9NQU5 681 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-215ENST00000536145 ACER3Q9NUN7 267 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 CLN6Q9NWW5 311 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 TXNL4BQ9NX01 149 aaKnown RBP6.65□□□□□ -1.34
CPSF7-215ENST00000536145 WWOXQ9NZC7 414 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 CLEC2DQ9UHP7 191 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 CPA4Q9UI42 421 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 PHF11Q9UIL8 331 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 STOML2Q9UJZ1 356 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 NDRG2Q9UN36 371 aaKnown RBP6.65□□□□□ -1.34
CPSF7-215ENST00000536145 GINS2Q9Y248 185 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 ITM2BQ9Y287 266 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 PRSS21Q9Y6M0 314 aa6.65□□□□□ -1.34
CPSF7-215ENST00000536145 ALPK3Q96L96 1907 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms