RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 CRTC2Q53ET0 693 aaPredicted RBP15.3■□□□□ 0.04
MCF2L-232ENST00000535094 USP45Q70EL2 814 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 TRIM46Q7Z4K8 759 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 BCL7BQ9BQE9 202 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 P2RY12Q9H244 342 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 CASKO14936 926 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 IFNA14P01570 189 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 IGFBP1P08833 259 aaPredicted RBP15.3■□□□□ 0.04
MCF2L-232ENST00000535094 MYL12AP19105 171 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 ITGA1P56199 1179 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 TARDBPQ13148 414 aaKnown RBP eCLIP15.3■□□□□ 0.04
MCF2L-232ENST00000535094 SLAMF1Q13291 335 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 TRMT11Q7Z4G4 463 aaKnown RBP15.3■□□□□ 0.04
MCF2L-232ENST00000535094 DNAJB8Q8NHS0 232 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 CIDECQ96AQ7 238 aaPredicted RBP15.3■□□□□ 0.04
MCF2L-232ENST00000535094 HTATIP2Q9BUP3 242 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 OR2B2Q9GZK3 357 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 CCDC177Q9NQR7 707 aaPredicted RBP15.3■□□□□ 0.04
MCF2L-232ENST00000535094 COQ3Q9NZJ6 369 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 ZNF646O15015 1829 aaPredicted RBP15.3■□□□□ 0.04
MCF2L-232ENST00000535094 NPIPB15A6NHN6 443 aaPredicted RBP15.29■□□□□ 0.04
MCF2L-232ENST00000535094 ITGA2P17301 1181 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 GPC1P35052 558 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 SLC16A1P53985 500 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 TBCEQ15813 527 aaPredicted RBP15.29■□□□□ 0.04
MCF2L-232ENST00000535094 TUBA3EQ6PEY2 450 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 SHFQ7M4L6 423 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 SERPINA11Q86U17 422 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 HRASLS5Q96KN8 279 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 TBC1D17Q9HA65 648 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 LSM7Q9UK45 103 aaKnown RBP15.29■□□□□ 0.04
MCF2L-232ENST00000535094 MEIOCA2RUB1 952 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 GSAPA4D1B5 854 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 KCNC4Q03721 635 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 IL18Q14116 193 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 RGNQ15493 299 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 SMU1Q2TAY7 513 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 FBXO43Q4G163 708 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 TRIM40Q6P9F5 258 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 THOC6Q86W42 341 aaKnown RBP15.29■□□□□ 0.04
MCF2L-232ENST00000535094 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.29■□□□□ 0.04
MCF2L-232ENST00000535094 MUTYHQ9UIF7 546 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 SLC13A4Q9UKG4 626 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 SNX7Q9UNH6 387 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 GPSM3Q9Y4H4 160 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 CD72P21854 359 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 SLC11A1P49279 550 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 TUFMP49411 452 aaKnown RBP15.29■□□□□ 0.04
MCF2L-232ENST00000535094 GPR17Q13304 367 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 GPRC6AQ5T6X5 926 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 GHDCQ8N2G8 530 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 WFDC5Q8TCV5 224 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 CCL27Q9Y4X3 112 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 KCNE2Q9Y6J6 123 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 MYLKQ15746 1914 aa15.29■□□□□ 0.04
MCF2L-232ENST00000535094 TRIM64BA6NI03 449 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 H7C4K7 107 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 TLR4O00206 839 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 ENTPD6O75354 484 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 CATP04040 527 aaKnown RBP15.28■□□□□ 0.04
MCF2L-232ENST00000535094 BMPR1AP36894 532 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 SRP54P61011 504 aaKnown RBP15.28■□□□□ 0.04
MCF2L-232ENST00000535094 HSPB3Q12988 150 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 PTOV1Q86YD1 416 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 DBF4BQ8NFT6 615 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 XAGE5Q8WWM1 108 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 AUTS2Q8WXX7 1259 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 POLR2J3Q9H1A7 115 aaKnown RBP15.28■□□□□ 0.04
MCF2L-232ENST00000535094 FAM120CQ9NX05 1096 aaKnown RBP15.28■□□□□ 0.04
MCF2L-232ENST00000535094 ZDHHC3Q9NYG2 299 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 ABT1Q9ULW3 272 aaKnown RBP15.28■□□□□ 0.04
MCF2L-232ENST00000535094 MRPS7Q9Y2R9 242 aaKnown RBP15.28■□□□□ 0.04
MCF2L-232ENST00000535094 HCN4Q9Y3Q4 1203 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 KLK1P06870 262 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 CR2P20023 1033 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 MYL9P24844 172 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 RPS26P11Q5JNZ5 115 aaPredicted RBP15.28■□□□□ 0.04
MCF2L-232ENST00000535094 ANXA8L1Q5VT79 327 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 ZNF366Q8N895 744 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 APH1BQ8WW43 257 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 ZNF566Q969W8 418 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 COQ8BQ96D53 544 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 TRIM45Q9H8W5 580 aaPredicted RBP15.28■□□□□ 0.04
MCF2L-232ENST00000535094 ATP6V1HQ9UI12 483 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 HSPB11Q9Y547 144 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 ZNF840PA6NDX5 716 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 HTR2BP41595 481 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 AP1S1P61966 158 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 IFITM2Q01629 132 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 GAB1Q13480 694 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 SPHARQ15513 63 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 ZNF284Q2VY69 593 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 TRAPPC5Q8IUR0 188 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 SUN5Q8TC36 379 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 NDUFAF4Q9P032 175 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 PCDHGB1Q9Y5G3 927 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 PARP14Q460N5 1801 aa15.28■□□□□ 0.04
MCF2L-232ENST00000535094 FAM172BPA6NC97 362 aa15.27■□□□□ 0.04
MCF2L-232ENST00000535094 BCHEP06276 602 aa15.27■□□□□ 0.04
MCF2L-232ENST00000535094 CLEC2LP0C7M8 214 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms