RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 FNDC5Q8NAU1 212 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 C11orf65Q8NCR3 313 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 RBM15BQ8NDT2 890 aaKnown RBP4.09□□□□□ -1.75
ITGB1-219ENST00000534049 SPATA4Q8NEY3 305 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 SLC24A4Q8NFF2 622 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 IL17REQ8NFR9 667 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 OR6Y1Q8NGX8 325 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 OR14A16Q8NHC5 309 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 SCAMP5Q8TAC9 235 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 LRRC20Q8TCA0 184 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 AGR3Q8TD06 166 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 HEXDCQ8WVB3 486 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 LPGAT1Q92604 370 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 TANKQ92844 425 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 NXPE2Q96DL1 559 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 RADILQ96JH8 1075 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 GFM1Q96RP9 751 aaKnown RBP4.09□□□□□ -1.75
ITGB1-219ENST00000534049 LLPHQ9BRT6 129 aaKnown RBP4.09□□□□□ -1.75
ITGB1-219ENST00000534049 CNPY3Q9BT09 278 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 TRAF4Q9BUZ4 470 aaPredicted RBP4.09□□□□□ -1.75
ITGB1-219ENST00000534049 TBC1D10AQ9BXI6 508 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 SLC19A3Q9BZV2 496 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 TWSG1Q9GZX9 223 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 ABHD16BQ9H3Z7 469 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 MRPS30Q9NP92 439 aaKnown RBP4.09□□□□□ -1.75
ITGB1-219ENST00000534049 DDX4Q9NQI0 724 aaKnown RBP4.09□□□□□ -1.75
ITGB1-219ENST00000534049 NUDT15Q9NV35 164 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 OR6C2Q9NZP2 312 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 FETUBQ9UGM5 382 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 CYB5R1Q9UHQ9 305 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 CNOT7Q9UIV1 285 aaKnown RBP4.09□□□□□ -1.75
ITGB1-219ENST00000534049 DBNLQ9UJU6 430 aaKnown RBP4.09□□□□□ -1.75
ITGB1-219ENST00000534049 TINAGQ9UJW2 476 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 PACSIN2Q9UNF0 486 aaPredicted RBP4.09□□□□□ -1.75
ITGB1-219ENST00000534049 DHDHQ9UQ10 334 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 HYOU1Q9Y4L1 999 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 GMPPBQ9Y5P6 360 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 NFS1Q9Y697 457 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 CEPT1Q9Y6K0 416 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 MN1Q10571 1320 aaPredicted RBP4.09□□□□□ -1.75
ITGB1-219ENST00000534049 STK36Q9NRP7 1315 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 MED23Q9ULK4 1368 aa4.09□□□□□ -1.75
ITGB1-219ENST00000534049 THSD7BQ9C0I4 1608 aa4.09□□□□□ -1.76
ITGB1-219ENST00000534049 ADAMTSL1Q8N6G6 1762 aa4.09□□□□□ -1.76
ITGB1-219ENST00000534049 DENND3A2RUS2 1198 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 SMIM23A6NLE4 172 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 H0YJX3 145 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 EEF2KO00418 725 aaKnown RBP4.08□□□□□ -1.76
ITGB1-219ENST00000534049 AIM2O14862 343 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 SYN3O14994 580 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 RIPK2O43353 540 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 SNAP91O60641 907 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 TBX10O75333 385 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 BCAS1O75363 584 aaPredicted RBP4.08□□□□□ -1.76
ITGB1-219ENST00000534049 CCNKO75909 580 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 SOX30O94993 753 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 PAPSS2O95340 614 aaPredicted RBP4.08□□□□□ -1.76
ITGB1-219ENST00000534049 METTL18O95568 372 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 PTBP3O95758 552 aaKnown RBP4.08□□□□□ -1.76
ITGB1-219ENST00000534049 DDAH2O95865 285 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 COL4A1P02462 1669 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 CD48P09326 243 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 NUDT17P0C025 328 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 TRAPPC2P0DI81 140 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 TRAPPC2BP0DI82 140 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 FCGR1AP12314 374 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 SRCP12931 536 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 PRG2P13727 222 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 PLA2G2AP14555 144 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 GNSP15586 552 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 CCNA2P20248 432 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 S100PP25815 95 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 YWHAQP27348 245 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 PSMA5P28066 241 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 MARCKSP29966 332 aaPredicted RBP4.08□□□□□ -1.76
ITGB1-219ENST00000534049 SERPINB1P30740 379 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 CYLC1P35663 651 aaPredicted RBP4.08□□□□□ -1.76
ITGB1-219ENST00000534049 UGT2B10P36537 528 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 ARL1P40616 181 aaPredicted RBP4.08□□□□□ -1.76
ITGB1-219ENST00000534049 PNPLA4P41247 253 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 GPR12P47775 334 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 ALDH3B2P48448 385 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 TKTL1P51854 596 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 NUDT6P53370 316 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 SUCLG1P53597 346 aaKnown RBP4.08□□□□□ -1.76
ITGB1-219ENST00000534049 PNLIPRP1P54315 467 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 CDH6P55285 790 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 SPCS3P61009 180 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 MAGOHP61326 146 aaKnown RBP4.08□□□□□ -1.76
ITGB1-219ENST00000534049 ABATP80404 500 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 APOFQ13790 326 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 SCARB2Q14108 478 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 FLOT2Q14254 428 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 HERC3Q15034 1050 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 TAF5Q15542 800 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 LTB4RQ15722 352 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 DPYSL2Q16555 572 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 HADHQ16836 314 aaKnown RBP4.08□□□□□ -1.76
ITGB1-219ENST00000534049 FER1L6Q2WGJ9 1857 aa4.08□□□□□ -1.76
ITGB1-219ENST00000534049 MMEL1Q495T6 779 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms