RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, human

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-208	ENST00000533897	UPK3BL2	E5RIL1	263 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897		J3KTA2	159 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897		J3QRE1	110 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	AP3D1	O14617	1153 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	HOXC11	O43248	304 aa	Predicted RBP	4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	AIRE	O43918	545 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	TSPAN3	O60637	253 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	TGFB1	P01137	390 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	STS	P08842	583 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	TRAPPC2	P0DI81	140 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	TRAPPC2B	P0DI82	140 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	DDOST	P39656	456 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	OCA2	Q04671	838 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	RIN1	Q13671	783 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	DOC2A	Q14183	400 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	SEC23B	Q15437	767 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	TAF1C	Q15572	869 aa	Predicted RBP	4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	COLEC12	Q5KU26	742 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	TPRG1L	Q5T0D9	272 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	AGAP6	Q5VW22	663 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	VASN	Q6EMK4	673 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	PTRHD1	Q6GMV3	140 aa	Known RBP	4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	UBE2R2	Q712K3	238 aa	Predicted RBP	4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	NPAS4	Q8IUM7	802 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	NPAS3	Q8IXF0	933 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	OR52N2	Q8NGI0	321 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	ZNF461	Q8TAF7	563 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	SETD6	Q8TBK2	473 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	BTN2A2	Q8WVV5	523 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	SH3KBP1	Q96B97	665 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	CRELD1	Q96HD1	420 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	AGAP4	Q96P64	663 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	KCNC2	Q96PR1	638 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	WRAP53	Q9BUR4	548 aa	Known RBP	4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	EBPL	Q9BY08	206 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	SERHL2	Q9H4I8	314 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	MAN2C1	Q9NTJ4	1040 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	STOX2	Q9P2F5	926 aa	Predicted RBP	4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	VPS29	Q9UBQ0	182 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	PLEKHB1	Q9UF11	243 aa	Predicted RBP	4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	POFUT2	Q9Y2G5	429 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	SAMHD1	Q9Y3Z3	626 aa	Known RBP	4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	YIPF1	Q9Y548	306 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	C2orf16	Q68DN1	1984 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	SPTBN5	Q9NRC6	3674 aa	Known RBP	4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	TRANK1	O15050	2925 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897		A0A1W2PQ45	241 aa	Predicted RBP	4.23	□□□□□ -1.73
CTSC-208	ENST00000533897		A0A1W2PQY0	241 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897		A8MU76	341 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	PCDH17	O14917	1159 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	FAM20B	O75063	409 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	AP2A2	O94973	939 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	ALPP	P05187	535 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	RPLP0	P05388	317 aa	Known RBP	4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	ARAF	P10398	606 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	ATP1B2	P14415	290 aa	Predicted RBP	4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	ITGAL	P20701	1170 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	PTX3	P26022	381 aa	Predicted RBP	4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	MAPK1	P28482	360 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	MAPK8	P45983	427 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	MAN2A2	P49641	1150 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	FLT3LG	P49771	235 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	RHOA	P61586	193 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	LSM3	P62310	102 aa	Known RBP	4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	PSPH	P78330	225 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	RBBP4	Q09028	425 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	LRRC74A	Q0VAA2	488 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	PTGES3	Q15185	160 aa	Known RBP	4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	EXOC3L2	Q2M3D2	409 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	C10orf62	Q5T681	223 aa	Predicted RBP	4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	SAXO2	Q658L1	398 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	TMEM215	Q68D42	235 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	RGMB	Q6NW40	437 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	TRIL	Q7L0X0	811 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	RNF130	Q86XS8	419 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	TCEAL8	Q8IYN2	117 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	RDH10	Q8IZV5	341 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	SLC7A5P1	Q8MH63	180 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	PAF1	Q8N7H5	531 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	MCFD2	Q8NI22	146 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	SELENOM	Q8WWX9	145 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	UPF1	Q92900	1129 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	GLMN	Q92990	594 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	TIMP4	Q99727	224 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	SPON2	Q9BUD6	331 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	TRAF4	Q9BUZ4	470 aa	Predicted RBP	4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	CFHR5	Q9BXR6	569 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	CEP44	Q9C0F1	390 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	EHD1	Q9H4M9	534 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	SARS2	Q9NP81	518 aa	Known RBP	4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	SLAMF7	Q9NQ25	335 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	SIRT3	Q9NTG7	399 aa	Predicted RBP	4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	DNAJC11	Q9NVH1	559 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	MUTYH	Q9UIF7	546 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	RUVBL1	Q9Y265	456 aa	Known RBP	4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	ZNF451	Q9Y4E5	1061 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	PCDHGB2	Q9Y5G2	931 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	EML5	Q05BV3	1969 aa		4.23	□□□□□ -1.73

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