RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 SOBPA7XYQ1 873 aa7.15□□□□□ -1.26
C11orf54-207ENST00000528288 KPNA4O00629 521 aaPredicted RBP7.15□□□□□ -1.26
C11orf54-207ENST00000528288 SLC22A1O15245 554 aa7.15□□□□□ -1.26
C11orf54-207ENST00000528288 SLCO2B1O94956 709 aa7.15□□□□□ -1.26
C11orf54-207ENST00000528288 CATP04040 527 aaKnown RBP7.15□□□□□ -1.26
C11orf54-207ENST00000528288 GSTM1P09488 218 aa7.15□□□□□ -1.26
C11orf54-207ENST00000528288 CTSAP10619 480 aa7.15□□□□□ -1.26
C11orf54-207ENST00000528288 JUNDP17535 347 aa7.15□□□□□ -1.26
C11orf54-207ENST00000528288 AP1S2P56377 157 aa7.15□□□□□ -1.26
C11orf54-207ENST00000528288 SCARB2Q14108 478 aa7.15□□□□□ -1.26
C11orf54-207ENST00000528288 OXA1LQ15070 435 aa7.15□□□□□ -1.26
C11orf54-207ENST00000528288 CPXM2Q8N436 756 aa7.15□□□□□ -1.26
C11orf54-207ENST00000528288 C11orf65Q8NCR3 313 aa7.15□□□□□ -1.26
C11orf54-207ENST00000528288 IRF7Q92985 503 aa7.15□□□□□ -1.26
C11orf54-207ENST00000528288 HHIPQ96QV1 700 aa7.15□□□□□ -1.26
C11orf54-207ENST00000528288 CENPOQ9BU64 300 aa7.15□□□□□ -1.26
C11orf54-207ENST00000528288 SLIRPQ9GZT3 109 aaKnown RBP7.15□□□□□ -1.26
C11orf54-207ENST00000528288 C11orf16Q9NQ32 467 aa7.15□□□□□ -1.26
C11orf54-207ENST00000528288 CTPS2Q9NRF8 586 aa7.15□□□□□ -1.26
C11orf54-207ENST00000528288 ERVW-1Q9UQF0 538 aa7.15□□□□□ -1.26
C11orf54-207ENST00000528288 REV3LO60673 3130 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 PCM1Q15154 2024 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 NPC1O15118 1278 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 SH3BP5O60239 455 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 NME6O75414 186 aaPredicted RBP7.15□□□□□ -1.27
C11orf54-207ENST00000528288 SPNP16150 400 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 POLR2EP19388 210 aaKnown RBP7.15□□□□□ -1.27
C11orf54-207ENST00000528288 TIA1P31483 386 aaKnown RBP eCLIP7.15□□□□□ -1.27
C11orf54-207ENST00000528288 ERVFC1P60507 584 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 POLR2LP62875 67 aaKnown RBP7.15□□□□□ -1.27
C11orf54-207ENST00000528288 CNTN1Q12860 1018 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 IL18R1Q13478 541 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 NFE2L1Q14494 772 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 HIST2H2ACQ16777 129 aaPredicted RBP7.15□□□□□ -1.27
C11orf54-207ENST00000528288 HENMT1Q5T8I9 393 aaKnown RBP7.15□□□□□ -1.27
C11orf54-207ENST00000528288 FAHD1Q6P587 224 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 SLCO4C1Q6ZQN7 724 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 WDR53Q7Z5U6 358 aaPredicted RBP7.15□□□□□ -1.27
C11orf54-207ENST00000528288 C11orf96Q7Z7L8 435 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 CELF5Q8N6W0 485 aaKnown RBP7.15□□□□□ -1.27
C11orf54-207ENST00000528288 KLHL23Q8NBE8 558 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 VPS37AQ8NEZ2 397 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 VN1R2Q8NFZ6 395 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 VANGL1Q8TAA9 524 aaPredicted RBP7.15□□□□□ -1.27
C11orf54-207ENST00000528288 BTN2A2Q8WVV5 523 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 GLYATL1Q969I3 302 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 ITFG2Q969R8 447 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 OR5M11Q96RB7 305 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 WFDC6Q9BQY6 131 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 CCM2Q9BSQ5 444 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 KLHL25Q9H0H3 589 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 GABARAPL1Q9H0R8 117 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 DSN1Q9H410 356 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 MS4A12Q9NXJ0 267 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 QPCTLQ9NXS2 382 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 ZNF226Q9NYT6 803 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 DUSP12Q9UNI6 340 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 AP3M1Q9Y2T2 418 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 KCNE2Q9Y6J6 123 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 EYSQ5T1H1 3165 aa7.15□□□□□ -1.27
C11orf54-207ENST00000528288 KDM1AO60341 852 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 ATG13O75143 517 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 PSIP1O75475 530 aaKnown RBP7.14□□□□□ -1.27
C11orf54-207ENST00000528288 CXCL10P02778 98 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 IL3P08700 152 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 CKMT1AP12532 417 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 NPPBP16860 134 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 PRPH2P23942 346 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 ACVR2AP27037 513 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 MVDP53602 400 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 SELENOWP63302 87 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 ST3GAL4Q11206 333 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 CSTF3Q12996 717 aaKnown RBP7.14□□□□□ -1.27
C11orf54-207ENST00000528288 MED22Q15528 200 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 GRHL2Q6ISB3 625 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 MED27Q6P2C8 311 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 ERICH5Q6P6B1 374 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 RBM45Q8IUH3 476 aaKnown RBP7.14□□□□□ -1.27
C11orf54-207ENST00000528288 FAM20CQ8IXL6 584 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 STX19Q8N4C7 294 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 DNAJB8Q8NHS0 232 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 CHTF18Q8WVB6 975 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 ZNF566Q969W8 418 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 KCNS3Q9BQ31 491 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 MACROD1Q9BQ69 325 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 EMILIN2Q9BXX0 1053 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 CHST8Q9H2A9 424 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 PCDHGB3Q9Y5G1 929 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 ATG2BQ96BY7 2078 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 PNMA8CA0A1B0GUJ8 204 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 SMIM30A4D0T7 59 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 MMP20O60882 483 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 CYP7B1O75881 506 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 IMPDH2P12268 514 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 SYN1P17600 705 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 CTSKP43235 329 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 TGM4P49221 684 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 DUSP7Q16829 419 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 DEFB115Q30KQ5 88 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 PROX2Q3B8N5 592 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms