RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 RPS24P62847 133 aaKnown RBP14.1□□□□□ -0.15
CAPN1-214ENST00000528165 SPRYD7Q5W111 196 aa14.1□□□□□ -0.15
CAPN1-214ENST00000528165 FRG2Q64ET8 278 aa14.1□□□□□ -0.15
CAPN1-214ENST00000528165 LRRC70Q7Z2Q7 622 aa14.1□□□□□ -0.15
CAPN1-214ENST00000528165 GPC2Q8N158 579 aa14.1□□□□□ -0.15
CAPN1-214ENST00000528165 FUBP3Q96I24 572 aaKnown RBP eCLIP14.1□□□□□ -0.15
CAPN1-214ENST00000528165 FRG2BQ96QU4 278 aa14.1□□□□□ -0.15
CAPN1-214ENST00000528165 DUSP26Q9BV47 211 aa14.1□□□□□ -0.15
CAPN1-214ENST00000528165 FLRT1Q9NZU1 646 aa14.1□□□□□ -0.15
CAPN1-214ENST00000528165 PCDHB8Q9UN66 801 aa14.1□□□□□ -0.15
CAPN1-214ENST00000528165 HCN4Q9Y3Q4 1203 aa14.1□□□□□ -0.15
CAPN1-214ENST00000528165 HYKKA2RU49 373 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 B8ZZF3 427 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 PDHXO00330 501 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 YY2O15391 372 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 C1QBP02746 253 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 RHOCP08134 193 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 ITGALP20701 1170 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 SNRPD2P62316 118 aaKnown RBP14.09□□□□□ -0.15
CAPN1-214ENST00000528165 LCN1P1Q5VSP4 162 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 CREB3L2Q70SY1 520 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 NAGSQ8N159 534 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 NPLOC4Q8TAT6 608 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 SLC25A46Q96AG3 418 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 UROC1Q96N76 676 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 NECTIN4Q96NY8 510 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 KATNAL1Q9BW62 490 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 ING3Q9NXR8 418 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 KCNN3Q9UGI6 736 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 CLEC2DQ9UHP7 191 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 TMPRSS11EQ9UL52 423 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 UTRNP46939 3433 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 AKR7A2O43488 359 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 TRIM3O75382 744 aaPredicted RBP14.09□□□□□ -0.15
CAPN1-214ENST00000528165 CSO75390 466 aaKnown RBP14.09□□□□□ -0.15
CAPN1-214ENST00000528165 GCM2O75603 506 aaPredicted RBP14.09□□□□□ -0.15
CAPN1-214ENST00000528165 TRBC1P01850 177 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 ALPIP09923 528 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 GPC1P35052 558 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 CPT1AP50416 773 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 CDH4P55283 916 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 HNRNPA0Q13151 305 aaKnown RBP14.09□□□□□ -0.15
CAPN1-214ENST00000528165 NFATC2Q13469 925 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 GRB14Q14449 540 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 ESCO2Q56NI9 601 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 DGKKQ5KSL6 1271 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 DDI2Q5TDH0 399 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 IQCF2Q8IXL9 164 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 RNF175Q8N4F7 328 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 TTC9BQ8N6N2 239 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 VPS37AQ8NEZ2 397 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 IL4I1Q96RQ9 567 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 TCF25Q9BQ70 676 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 MIXL1Q9H2W2 232 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 CCSER2Q9H7U1 834 aa14.09□□□□□ -0.15
CAPN1-214ENST00000528165 LSM2Q9Y333 95 aaKnown RBP14.09□□□□□ -0.15
CAPN1-214ENST00000528165 ZAR1LA6NP61 321 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 WWP2O00308 870 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 PCDH17O14917 1159 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 PLA2G10O15496 165 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 SEC14L5O43304 696 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 PCDH7O60245 1069 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 AP2A2O94973 939 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 IGHA2P01877 340 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 ALAS2P22557 587 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 ITGB7P26010 798 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 UQCRC1P31930 480 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 CRATP43155 626 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 NATD1Q8N6N6 113 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 AQP11Q8NBQ7 271 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 FAM46DQ8NEK8 389 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 ANKK1Q8NFD2 765 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 CREB3L4Q8TEY5 395 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 PIH1D2Q8WWB5 315 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 MND1Q9BWT6 205 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 POLR2J2Q9GZM3 115 aaKnown RBP14.08□□□□□ -0.16
CAPN1-214ENST00000528165 RACGAP1Q9H0H5 632 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 NDUFB11Q9NX14 153 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 CRLS1Q9UJA2 301 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 PLXNA3P51805 1871 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 NPIPB8E9PQR5 432 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 MEN1O00255 615 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 ENTPD6O75354 484 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 UBL4AP11441 157 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 PSKH1P11801 424 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 SSTR4P31391 388 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 CRISP1P54107 249 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 MADCAM1Q13477 382 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 IDO2Q6ZQW0 420 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 FAM20CQ8IXL6 584 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 ATAD1Q8NBU5 361 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 KLHL6Q8WZ60 621 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 HSPB11Q9Y547 144 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 ALG5Q9Y673 324 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 GREB1Q4ZG55 1949 aa14.08□□□□□ -0.16
CAPN1-214ENST00000528165 J3KTA2 159 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 ACSL4O60488 711 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 IL1AP01583 271 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 CYP2A6P11509 494 aaPredicted RBP14.07□□□□□ -0.16
CAPN1-214ENST00000528165 MAP2K3P46734 347 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms