RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 TSSK3Q96PN8 268 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 ALG2Q9H553 416 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 PELI2Q9HAT8 420 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 BRF2Q9HAW0 419 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 EVA1BQ9NVM1 165 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 NCDNQ9UBB6 729 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 IGHV1OR21-1A0A087WYE8 117 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 TCRBV3S1A0A5B6 114 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 EME2A4GXA9 379 aaPredicted RBP17.94■□□□□ 0.46
SMPD1-203ENST00000527275 KCNH1O95259 989 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 ATP6V1C1P21283 382 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 EEFSECP57772 596 aaKnown RBP17.94■□□□□ 0.46
SMPD1-203ENST00000527275 LIPEQ05469 1076 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 NR1D2Q14995 579 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 TRIP10Q15642 601 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 IRGCQ6NXR0 463 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 TLDC1Q6P9B6 456 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 TMIGD1Q6UXZ0 262 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 PRR23CQ6ZRP0 262 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 PLD3Q8IV08 490 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 NCSTNQ92542 709 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 GTF2H4Q92759 462 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 CGREF1Q99674 301 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 ZNF184Q99676 751 aaPredicted RBP17.94■□□□□ 0.46
SMPD1-203ENST00000527275 AIF1LQ9BQI0 150 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 KLHL25Q9H0H3 589 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 ABCG4Q9H172 646 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 PRM3Q9NNZ6 103 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 EGFL7Q9UHF1 273 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 POMT2Q9UKY4 750 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 PRSS51A0A1B0GVH4 220 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 MAGEB17A8MXT2 336 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 CASQ2O14958 399 aaPredicted RBP17.93■□□□□ 0.46
SMPD1-203ENST00000527275 PVRP15151 417 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 ACADSP16219 412 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 GRK6P43250 576 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 GSK3BP49841 420 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 CLNS1AP54105 237 aaKnown RBP17.93■□□□□ 0.46
SMPD1-203ENST00000527275 LAPTM5Q13571 262 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 LRRC36Q1X8D7 754 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 AMZ1Q400G9 498 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 ZNF425Q6IV72 752 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 IFNEQ86WN2 208 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 OR6C4Q8NGE1 309 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 HUS1BQ8NHY5 278 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 REPS1Q96D71 796 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 AHCYL2Q96HN2 611 aaKnown RBP17.93■□□□□ 0.46
SMPD1-203ENST00000527275 FCRL1Q96LA6 429 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 OR52E6Q96RD3 313 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 EDEM2Q9BV94 578 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 VCX3BQ9H321 246 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 COPS7BQ9H9Q2 264 aaPredicted RBP17.93■□□□□ 0.46
SMPD1-203ENST00000527275 PARD6AQ9NPB6 346 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 TMEM184CQ9NVA4 438 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 PCDHGB2Q9Y5G2 931 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 CAPN5O15484 640 aaPredicted RBP17.93■□□□□ 0.46
SMPD1-203ENST00000527275 HOXB3P14651 431 aaPredicted RBP17.93■□□□□ 0.46
SMPD1-203ENST00000527275 CSRP2Q16527 193 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 HIST2H2ACQ16777 129 aaPredicted RBP17.93■□□□□ 0.46
SMPD1-203ENST00000527275 PROX2Q3B8N5 592 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 CMPK2Q5EBM0 449 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 PERM1Q5SV97 790 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 HIST2H2AA3Q6FI13 130 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 SPRED1Q7Z699 444 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 LAS2Q8IYD9 372 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 KRT78Q8N1N4 520 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 KCTD14Q9BQ13 255 aaPredicted RBP17.93■□□□□ 0.46
SMPD1-203ENST00000527275 KLHL4Q9C0H6 718 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 ACTR3BQ9P1U1 418 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 SNX7Q9UNH6 387 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 AP4S1Q9Y587 144 aa17.93■□□□□ 0.46
SMPD1-203ENST00000527275 ZFHX2Q9C0A1 2572 aaPredicted RBP17.92■□□□□ 0.46
SMPD1-203ENST00000527275 PRAMEF10O60809 474 aa17.92■□□□□ 0.46
SMPD1-203ENST00000527275 CKMT1AP12532 417 aa17.92■□□□□ 0.46
SMPD1-203ENST00000527275 ATP6V1B2P21281 511 aa17.92■□□□□ 0.46
SMPD1-203ENST00000527275 CXCR2P25025 360 aa17.92■□□□□ 0.46
SMPD1-203ENST00000527275 PEX2P28328 305 aa17.92■□□□□ 0.46
SMPD1-203ENST00000527275 GFERP55789 205 aa17.92■□□□□ 0.46
SMPD1-203ENST00000527275 RBBP5Q15291 538 aaKnown RBP17.92■□□□□ 0.46
SMPD1-203ENST00000527275 SLC5A12Q1EHB4 618 aa17.92■□□□□ 0.46
SMPD1-203ENST00000527275 IZUMO2Q6UXV1 221 aa17.92■□□□□ 0.46
SMPD1-203ENST00000527275 USP53Q70EK8 1073 aa17.92■□□□□ 0.46
SMPD1-203ENST00000527275 ANKRD53Q8N9V6 530 aa17.92■□□□□ 0.46
SMPD1-203ENST00000527275 DUS3LQ96G46 650 aaKnown RBP17.92■□□□□ 0.46
SMPD1-203ENST00000527275 METTL2AQ96IZ6 378 aaKnown RBP17.92■□□□□ 0.46
SMPD1-203ENST00000527275 EGLN2Q96KS0 407 aa17.92■□□□□ 0.46
SMPD1-203ENST00000527275 EBPLQ9BY08 206 aa17.92■□□□□ 0.46
SMPD1-203ENST00000527275 MCM8Q9UJA3 840 aa17.92■□□□□ 0.46
SMPD1-203ENST00000527275 RUVBL1Q9Y265 456 aaKnown RBP17.92■□□□□ 0.46
SMPD1-203ENST00000527275 MDC1Q14676 2089 aaKnown RBP17.92■□□□□ 0.46
SMPD1-203ENST00000527275 OR1F1O43749 312 aa17.91■□□□□ 0.46
SMPD1-203ENST00000527275 LCMT2O60294 686 aaKnown RBP17.91■□□□□ 0.46
SMPD1-203ENST00000527275 ETHE1O95571 254 aa17.91■□□□□ 0.46
SMPD1-203ENST00000527275 PNLIPP16233 465 aa17.91■□□□□ 0.46
SMPD1-203ENST00000527275 HRH2P25021 359 aa17.91■□□□□ 0.46
SMPD1-203ENST00000527275 CD1CP29017 333 aa17.91■□□□□ 0.46
SMPD1-203ENST00000527275 S100A3P33764 101 aa17.91■□□□□ 0.46
SMPD1-203ENST00000527275 GPLD1P80108 840 aa17.91■□□□□ 0.46
SMPD1-203ENST00000527275 DAB2P98082 770 aa17.91■□□□□ 0.46
SMPD1-203ENST00000527275 REEP5Q00765 189 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms