RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 C12orf4Q9NQ89 552 aa3.24□□□□□ -1.89
LINCR-0001-203ENST00000524047 ENTPD7Q9NQZ7 604 aa3.24□□□□□ -1.89
LINCR-0001-203ENST00000524047 C8orf4Q9NR00 106 aa3.24□□□□□ -1.89
LINCR-0001-203ENST00000524047 INTS9Q9NV88 658 aaKnown RBP3.24□□□□□ -1.89
LINCR-0001-203ENST00000524047 GIN1Q9NXP7 522 aa3.24□□□□□ -1.89
LINCR-0001-203ENST00000524047 NINJ2Q9NZG7 142 aa3.24□□□□□ -1.89
LINCR-0001-203ENST00000524047 SENP1Q9P0U3 644 aa3.24□□□□□ -1.89
LINCR-0001-203ENST00000524047 FETUBQ9UGM5 382 aa3.24□□□□□ -1.89
LINCR-0001-203ENST00000524047 POLG2Q9UHN1 485 aa3.24□□□□□ -1.89
LINCR-0001-203ENST00000524047 LGALS13Q9UHV8 139 aa3.24□□□□□ -1.89
LINCR-0001-203ENST00000524047 CYTH4Q9UIA0 394 aa3.24□□□□□ -1.89
LINCR-0001-203ENST00000524047 CD207Q9UJ71 328 aa3.24□□□□□ -1.89
LINCR-0001-203ENST00000524047 TSPAN16Q9UKR8 245 aa3.24□□□□□ -1.89
LINCR-0001-203ENST00000524047 DNPEPQ9ULA0 475 aa3.24□□□□□ -1.89
LINCR-0001-203ENST00000524047 IFT52Q9Y366 437 aa3.24□□□□□ -1.89
LINCR-0001-203ENST00000524047 PLXNA3P51805 1871 aa3.24□□□□□ -1.89
LINCR-0001-203ENST00000524047 COL4A4P53420 1690 aaPredicted RBP3.24□□□□□ -1.89
LINCR-0001-203ENST00000524047 DOCK4Q8N1I0 1966 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 GREB1Q4ZG55 1949 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 MYO18AQ92614 2054 aaKnown RBP3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 A0A1B0GVM2 712 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 KPNA7A9QM74 516 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 E7ESA3 106 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 PI4K2BG5E9Z4 385 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 M0QZ92 97 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 PEX12O00623 359 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 PIRO00625 290 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 TIMM23O14925 209 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 CASQ2O14958 399 aaPredicted RBP3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 IRAK2O43187 625 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 PRPSAP2O60256 369 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 CST8O60676 142 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 NBNO60934 754 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 TMCC2O75069 709 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 CSDE1O75534 798 aaKnown RBP3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 SPAG6O75602 509 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 BAIAP3O94812 1187 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 KLHL2O95198 593 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 CELF2O95319 508 aaKnown RBP3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 ACSL3O95573 720 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 PPP1R3DO95685 299 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 ADAP00813 363 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 TPBGLP0DKB5 382 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 KRT10P13645 584 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 KCNE1P15382 129 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 TCF4P15884 667 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 PDGFRAP16234 1089 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 CTPS1P17812 591 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 POLR2CP19387 275 aaPredicted RBP3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 IL10P22301 178 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 PSMA4P25789 261 aaKnown RBP3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 CRABP2P29373 138 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 MIPP30301 263 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 HOXC8P31273 242 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 SDC4P31431 198 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 IFNA8P32881 189 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 RPL9P32969 192 aaKnown RBP3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 EVI2BP34910 448 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 PPARGP37231 505 aaPredicted RBP3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 RPL3P39023 403 aaKnown RBP3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 GRK6P43250 576 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 NR2C2P49116 596 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 RPL34P49207 117 aaKnown RBP3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 TAF6P49848 677 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 BCAP31P51572 246 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 HNRNPFP52597 415 aaKnown RBP3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 CRYBB1P53674 252 aaPredicted RBP3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 ARL4CP56559 192 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 RPS3AP61247 264 aaKnown RBP3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 RPL26P61254 145 aaKnown RBP3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 NCALDP61601 193 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 S100A12P80511 92 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 OTUD4Q01804 1114 aaKnown RBP3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 BNC1Q01954 994 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 RELQ04864 619 aaPredicted RBP3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 EEF1A2Q05639 463 aaKnown RBP3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 SLC18A2Q05940 514 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 BST2Q10589 180 aaKnown RBP3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 GRSF1Q12849 480 aaKnown RBP eCLIP3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 GNA13Q14344 377 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 SQLEQ14534 574 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 LPIN1Q14693 890 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 CYTH1Q15438 398 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 TRIP13Q15645 432 aaPredicted RBP3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 KYNUQ16719 465 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 PHKG1Q16816 387 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 GOLGA7BQ2TAP0 167 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 FBXO47Q5MNV8 452 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 CCNJQ5T5M9 372 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 C6orf183Q5T699 404 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 RNASEH2BQ5TBB1 312 aaKnown RBP3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 METTL11BQ5VVY1 283 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 OR6B2Q6IFH4 312 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 RETSATQ6NUM9 610 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 NIPAL1Q6NVV3 410 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 LRRC8BQ6P9F7 803 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 KLHL35Q6PF15 583 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 DHRS4L2Q6PKH6 230 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 FAM183BPQ6ZVS7 135 aa3.23□□□□□ -1.89
LINCR-0001-203ENST00000524047 TRPM8Q7Z2W7 1104 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms