RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 OR6K6Q8NGW6 343 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 SLC30A2Q9BRI3 323 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 PAAF1Q9BRP4 392 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 TDP1Q9NUW8 608 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 PGAP2Q9UHJ9 254 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 UTS2RQ9UKP6 389 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 OARD1Q9Y530 152 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 ANKRD33BA6NCL7 494 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 AGR2O95994 175 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 ARCN1P48444 511 aaKnown RBP13.34□□□□□ -0.27
SYNPO-205ENST00000522122 DNASE1L3Q13609 305 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 SPRED1Q7Z699 444 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 ADGRD2Q7Z7M1 963 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 SERINC5Q86VE9 423 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 CNIH3Q8TBE1 160 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 PCTPQ9UKL6 214 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 RWDD3Q9Y3V2 267 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 PTGESO14684 152 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 CDRT1O95170 752 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 GNAO1P09471 354 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 ACTR1BP42025 376 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 PREPP48147 710 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 ACTR1AP61163 376 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 ST3GAL3Q11203 375 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 GPR68Q15743 365 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 CES4AQ5XG92 561 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 KLHL24Q6TFL4 600 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 ATCAYQ86WG3 371 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 CCDC36Q8IYA8 594 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 TMEM145Q8NBT3 493 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 CNDP2Q96KP4 475 aaKnown RBP13.34□□□□□ -0.27
SYNPO-205ENST00000522122 COMMD4Q9H0A8 199 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 REEP4Q9H6H4 257 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 INSL5Q9Y5Q6 135 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 CFAP20Q9Y6A4 193 aaKnown RBP13.34□□□□□ -0.27
SYNPO-205ENST00000522122 FAM170BA6NMN3 283 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 CD2P06729 351 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 KCNA5P22460 613 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 SLC13A2Q13183 592 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 ABRAXAS2Q15018 415 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 LIPJQ5W064 366 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 SHQ1Q6PI26 577 aaKnown RBP13.34□□□□□ -0.27
SYNPO-205ENST00000522122 ZNF517Q6ZMY9 492 aaPredicted RBP13.34□□□□□ -0.27
SYNPO-205ENST00000522122 RNF130Q86XS8 419 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 ARHGAP12Q8IWW6 846 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 OR9A1PQ8NGU1 263 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 NT5C3BQ969T7 300 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 FUNDC2Q9BWH2 189 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 MKKSQ9NPJ1 570 aaPredicted RBP13.34□□□□□ -0.27
SYNPO-205ENST00000522122 ST14Q9Y5Y6 855 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 MYO18AQ92614 2054 aaKnown RBP13.33□□□□□ -0.27
SYNPO-205ENST00000522122 ANXA2P2A6NMY6 339 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 LDOC1O95751 146 aaPredicted RBP13.33□□□□□ -0.28
SYNPO-205ENST00000522122 ANXA2P07355 339 aaKnown RBP13.33□□□□□ -0.28
SYNPO-205ENST00000522122 GABRB3P28472 473 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 GBX2P52951 348 aaPredicted RBP13.33□□□□□ -0.28
SYNPO-205ENST00000522122 PIGKQ92643 395 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 TRIB3Q96RU7 358 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 GPER1Q99527 375 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 OLAHQ9NV23 265 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 AURKAO14965 403 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 HNF1BP35680 557 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 OR1E2P47887 323 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 PRPF38BQ5VTL8 546 aaKnown RBP13.33□□□□□ -0.28
SYNPO-205ENST00000522122 RASSF6Q6ZTQ3 369 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 TCEANCQ8N8B7 351 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 EFHD2Q96C19 240 aaPredicted RBP13.33□□□□□ -0.28
SYNPO-205ENST00000522122 BCL2L14Q9BZR8 327 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 MGAT4BQ9UQ53 548 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 PCDHGB1Q9Y5G3 927 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 PDCD5O14737 125 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 S100A9P06702 114 aaKnown RBP13.33□□□□□ -0.28
SYNPO-205ENST00000522122 GALTP07902 379 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 TYRP14679 529 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 PRMT2P55345 433 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 ST3GAL4Q11206 333 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 PPIGQ13427 754 aaKnown RBP eCLIP13.33□□□□□ -0.28
SYNPO-205ENST00000522122 PDGFRLQ15198 375 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 ARL9Q6T311 187 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 PAMR1Q6UXH9 720 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 ZSWIM3Q96MP5 696 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 ZDHHC4Q9NPG8 344 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 DNAJC27Q9NZQ0 273 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 CD300AQ9UGN4 299 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 HSPE1-MOB4S4R3N1 261 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 LRRC37AA6NMS7 1700 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 INPPL1O15357 1258 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 ATE1O95260 518 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 PDYNP01213 254 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 ACVR2AP27037 513 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 NDUFS1P28331 727 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 DPP6P42658 865 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 DNASE1L1P49184 302 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 RPL34P49207 117 aaKnown RBP13.33□□□□□ -0.28
SYNPO-205ENST00000522122 CDH11P55287 796 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 FOXA1P55317 472 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 PIGFQ07326 219 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 TMEM115Q12893 351 aaPredicted RBP13.33□□□□□ -0.28
SYNPO-205ENST00000522122 C10orf62Q5T681 223 aaPredicted RBP13.33□□□□□ -0.28
SYNPO-205ENST00000522122 FAAH2Q6GMR7 532 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms