RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 C12orf10Q9HB07 376 aa6.11□□□□□ -1.43
NUDCD1-204ENST00000521439 FANCEQ9HB96 536 aa6.11□□□□□ -1.43
NUDCD1-204ENST00000521439 C8orf4Q9NR00 106 aa6.11□□□□□ -1.43
NUDCD1-204ENST00000521439 ATAD3AQ9NVI7 634 aa6.11□□□□□ -1.43
NUDCD1-204ENST00000521439 TAAR2Q9P1P5 351 aa6.11□□□□□ -1.43
NUDCD1-204ENST00000521439 ATXN10Q9UBB4 475 aa6.11□□□□□ -1.43
NUDCD1-204ENST00000521439 EXTL2Q9UBQ6 330 aa6.11□□□□□ -1.43
NUDCD1-204ENST00000521439 MOSPD1Q9UJG1 213 aa6.11□□□□□ -1.43
NUDCD1-204ENST00000521439 SLC7A7Q9UM01 511 aa6.11□□□□□ -1.43
NUDCD1-204ENST00000521439 CBY1Q9Y3M2 126 aa6.11□□□□□ -1.43
NUDCD1-204ENST00000521439 ERCC6Q03468 1493 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 SYCE3A1L190 88 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 OR6C76A6NM76 312 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 LRRIQ3A6PVS8 624 aaPredicted RBP6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 CRYAAP02489 173 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 APOEP02649 317 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 FGF5P12034 268 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 H2AFXP16104 143 aaPredicted RBP6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 CD22P20273 847 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 EPHA2P29317 976 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 HOXC8P31273 242 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 LHX1P48742 406 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 SERPINB8P50452 374 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 ARL16Q0P5N6 197 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 ZNF718Q3SXZ3 478 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 ELFN2Q5R3F8 820 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 ARHGAP11AQ6P4F7 1023 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 DCLRE1AQ6PJP8 1040 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 C6orf89Q6UWU4 347 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 ZYG11AQ6WRX3 759 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 NUP54Q7Z3B4 507 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 ZNF554Q86TJ5 538 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 CD302Q8IX05 232 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 CCDC63Q8NA47 563 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 DENND6BQ8NEG7 585 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 LILRB4Q8NHJ6 448 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 AGR3Q8TD06 166 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 RNF139Q8WU17 664 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 TUBGCP3Q96CW5 907 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 CABS1Q96KC9 395 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 MGME1Q9BQP7 344 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 NUSAP1Q9BXS6 441 aaKnown RBP6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 XKR8Q9H6D3 395 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 ZFP57Q9NU63 452 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 FAM118AQ9NWS6 357 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 EXOC6BQ9Y2D4 811 aa6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 INO80Q9ULG1 1556 aaPredicted RBP6.1□□□□□ -1.43
NUDCD1-204ENST00000521439 RTL1A6NKG5 1358 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 NUP155O75694 1391 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 MACROD2A1Z1Q3 448 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 XPNPEP2O43895 674 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 NIPSNAP2O75323 286 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 FLOT1O75955 427 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 ACSL3O95573 720 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 PLGP00747 810 aaPredicted RBP6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 HLA-DRAP01903 254 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 INHBAP08476 426 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 ALOX5P09917 674 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 POLR2MP0CAP2 368 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 SAGP10523 405 aaPredicted RBP6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 PRKAR1AP10644 381 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 PDHBP11177 359 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 MX1P20591 662 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 AZGP1P25311 298 aaKnown RBP6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 MAPK3P27361 379 aaPredicted RBP6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 CDC25CP30307 473 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 PDX1P52945 283 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 ARFIP1P53367 373 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 GSTO1P78417 241 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 RBP5P82980 135 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 MZT1Q08AG7 82 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 ITGB3BPQ13352 177 aaPredicted RBP6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 IDI1Q13907 227 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 BCL2A1Q16548 175 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 C6orf136Q5SQH8 315 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 C11orf63Q6NUN7 778 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 DNAJB7Q7Z6W7 309 aaPredicted RBP6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 COMTD1Q86VU5 262 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 NUDT13Q86X67 352 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 STX12Q86Y82 276 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 FOXP4Q8IVH2 680 aaPredicted RBP6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 NUP93Q8N1F7 819 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 CIARTQ8N365 385 aaPredicted RBP6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 ZNF565Q8N9K5 539 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 ENKURQ8TC29 256 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 DEPDC1BQ8WUY9 529 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 OPTNQ96CV9 577 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 SLC47A1Q96FL8 570 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 RUNDC3BQ96NL0 473 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 SECISBP2Q96T21 854 aaKnown RBP6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 DDX50Q9BQ39 737 aaKnown RBP6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 FZD8Q9H461 694 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 HAUS4Q9H6D7 363 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 UCK1Q9HA47 277 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 POLE3Q9NRF9 147 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 GLRX2Q9NS18 164 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 GKN1Q9NS71 199 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 KCNG2Q9UJ96 466 aa6.09□□□□□ -1.43
NUDCD1-204ENST00000521439 EFCAB6Q5THR3 1501 aa6.09□□□□□ -1.44
NUDCD1-204ENST00000521439 NUP153P49790 1475 aaKnown RBP6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms