RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 BMPR2Q13873 1038 aa23.06■■□□□ 1.28
SNF8-213ENST00000514929 SFT2D3Q587I9 215 aa23.06■■□□□ 1.28
SNF8-213ENST00000514929 XKR6Q5GH73 641 aa23.06■■□□□ 1.28
SNF8-213ENST00000514929 MROH9Q5TGP6 573 aa23.06■■□□□ 1.28
SNF8-213ENST00000514929 ABHD17BQ5VST6 288 aa23.06■■□□□ 1.28
SNF8-213ENST00000514929 ISCA2Q86U28 154 aa23.06■■□□□ 1.28
SNF8-213ENST00000514929 TSLPQ969D9 159 aa23.06■■□□□ 1.28
SNF8-213ENST00000514929 SMIM10Q96HG1 83 aa23.06■■□□□ 1.28
SNF8-213ENST00000514929 FAR2Q96K12 515 aa23.06■■□□□ 1.28
SNF8-213ENST00000514929 MAGEB10Q96LZ2 347 aaPredicted RBP23.06■■□□□ 1.28
SNF8-213ENST00000514929 LPAR4Q99677 370 aa23.06■■□□□ 1.28
SNF8-213ENST00000514929 PITHD1Q9GZP4 211 aaPredicted RBP23.06■■□□□ 1.28
SNF8-213ENST00000514929 EHD1Q9H4M9 534 aa23.06■■□□□ 1.28
SNF8-213ENST00000514929 NT5DC2Q9H857 520 aa23.06■■□□□ 1.28
SNF8-213ENST00000514929 NINJ2Q9NZG7 142 aa23.06■■□□□ 1.28
SNF8-213ENST00000514929 NUDT4Q9NZJ9 180 aa23.06■■□□□ 1.28
SNF8-213ENST00000514929 DMGDHQ9UI17 866 aaKnown RBP23.06■■□□□ 1.28
SNF8-213ENST00000514929 RP1L1Q8IWN7 2480 aaPredicted RBP23.05■■□□□ 1.28
SNF8-213ENST00000514929 A8MUI8 341 aa23.05■■□□□ 1.28
SNF8-213ENST00000514929 SUPT3HB4E1H0 165 aa23.05■■□□□ 1.28
SNF8-213ENST00000514929 SUPT3HO75486 399 aa23.05■■□□□ 1.28
SNF8-213ENST00000514929 AGFG2O95081 481 aa23.05■■□□□ 1.28
SNF8-213ENST00000514929 TUBB4AP04350 444 aa23.05■■□□□ 1.28
SNF8-213ENST00000514929 CTAGE8P0CG41 777 aa23.05■■□□□ 1.28
SNF8-213ENST00000514929 RNH1P13489 461 aaKnown RBP23.05■■□□□ 1.28
SNF8-213ENST00000514929 KCNC1P48547 511 aa23.05■■□□□ 1.28
SNF8-213ENST00000514929 OR4D2P58180 307 aa23.05■■□□□ 1.28
SNF8-213ENST00000514929 EXT1Q16394 746 aa23.05■■□□□ 1.28
SNF8-213ENST00000514929 EIF2S3LQ2VIR3 472 aaKnown RBP23.05■■□□□ 1.28
SNF8-213ENST00000514929 PAPD4Q6PIY7 484 aaKnown RBP23.05■■□□□ 1.28
SNF8-213ENST00000514929 CTAGE4Q8IX94 777 aa23.05■■□□□ 1.28
SNF8-213ENST00000514929 OR1N1Q8NGS0 311 aa23.05■■□□□ 1.28
SNF8-213ENST00000514929 IFT81Q8WYA0 676 aa23.05■■□□□ 1.28
SNF8-213ENST00000514929 HAS2Q92819 552 aa23.05■■□□□ 1.28
SNF8-213ENST00000514929 GAL3ST3Q96A11 431 aa23.05■■□□□ 1.28
SNF8-213ENST00000514929 PTCD3Q96EY7 689 aaKnown RBP23.05■■□□□ 1.28
SNF8-213ENST00000514929 SEC16BQ96JE7 1060 aa23.05■■□□□ 1.28
SNF8-213ENST00000514929 CD244Q9BZW8 370 aa23.05■■□□□ 1.28
SNF8-213ENST00000514929 TSPYL1Q9H0U9 437 aa23.05■■□□□ 1.28
SNF8-213ENST00000514929 RHBGQ9H310 441 aa23.05■■□□□ 1.28
SNF8-213ENST00000514929 IGSF5Q9NSI5 407 aa23.05■■□□□ 1.28
SNF8-213ENST00000514929 COPG2Q9UBF2 871 aa23.05■■□□□ 1.28
SNF8-213ENST00000514929 COL12A1Q99715 3063 aa23.05■■□□□ 1.28
SNF8-213ENST00000514929 HECTD1Q9ULT8 2610 aa23.04■■□□□ 1.28
SNF8-213ENST00000514929 A0A087X1B8 175 aa23.04■■□□□ 1.28
SNF8-213ENST00000514929 C4orf51C9J302 202 aa23.04■■□□□ 1.28
SNF8-213ENST00000514929 KIF2AO00139 706 aaPredicted RBP23.04■■□□□ 1.28
SNF8-213ENST00000514929 KERAO60938 352 aa23.04■■□□□ 1.28
SNF8-213ENST00000514929 F10P00742 488 aa23.04■■□□□ 1.28
SNF8-213ENST00000514929 TNFSF10P50591 281 aa23.04■■□□□ 1.28
SNF8-213ENST00000514929 BTN3A2P78410 334 aa23.04■■□□□ 1.28
SNF8-213ENST00000514929 ZNF33BQ06732 778 aa23.04■■□□□ 1.28
SNF8-213ENST00000514929 DOC2AQ14183 400 aa23.04■■□□□ 1.28
SNF8-213ENST00000514929 LRRC70Q7Z2Q7 622 aa23.04■■□□□ 1.28
SNF8-213ENST00000514929 CCDC91Q7Z6B0 441 aa23.04■■□□□ 1.28
SNF8-213ENST00000514929 PRR7Q8TB68 274 aa23.04■■□□□ 1.28
SNF8-213ENST00000514929 KCTD4Q8WVF5 259 aa23.04■■□□□ 1.28
SNF8-213ENST00000514929 NXNL1Q96CM4 212 aa23.04■■□□□ 1.28
SNF8-213ENST00000514929 PTCHD1Q96NR3 888 aa23.04■■□□□ 1.28
SNF8-213ENST00000514929 EFCAB11Q9BUY7 163 aa23.04■■□□□ 1.28
SNF8-213ENST00000514929 AICDAQ9GZX7 198 aa23.04■■□□□ 1.28
SNF8-213ENST00000514929 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.04■■□□□ 1.28
SNF8-213ENST00000514929 KCNK13Q9HB14 408 aa23.04■■□□□ 1.28
SNF8-213ENST00000514929 SNX15Q9NRS6 342 aa23.04■■□□□ 1.28
SNF8-213ENST00000514929 A0A0G2JN53 185 aa23.03■■□□□ 1.28
SNF8-213ENST00000514929 LRIT2A6NDA9 550 aa23.03■■□□□ 1.28
SNF8-213ENST00000514929 UBXN8O00124 270 aa23.03■■□□□ 1.28
SNF8-213ENST00000514929 ERI3O43414 337 aaKnown RBP23.03■■□□□ 1.28
SNF8-213ENST00000514929 PRMT3O60678 531 aa23.03■■□□□ 1.28
SNF8-213ENST00000514929 PRAMEF4O60810 478 aa23.03■■□□□ 1.28
SNF8-213ENST00000514929 CLEC3AO75596 197 aa23.03■■□□□ 1.28
SNF8-213ENST00000514929 C2P06681 752 aa23.03■■□□□ 1.28
SNF8-213ENST00000514929 HNRNPH1P31943 449 aaKnown RBP23.03■■□□□ 1.28
SNF8-213ENST00000514929 HPDP32754 393 aaPredicted RBP23.03■■□□□ 1.28
SNF8-213ENST00000514929 IRF8Q02556 426 aa23.03■■□□□ 1.28
SNF8-213ENST00000514929 LAPTM5Q13571 262 aa23.03■■□□□ 1.28
SNF8-213ENST00000514929 ELOAQ14241 798 aaKnown RBP23.03■■□□□ 1.28
SNF8-213ENST00000514929 FAM83EQ2M2I3 478 aa23.03■■□□□ 1.28
SNF8-213ENST00000514929 PAGE2BQ5JRK9 111 aa23.03■■□□□ 1.28
SNF8-213ENST00000514929 PRAMEF9Q5VWM5 478 aa23.03■■□□□ 1.28
SNF8-213ENST00000514929 RELL1Q8IUW5 271 aa23.03■■□□□ 1.28
SNF8-213ENST00000514929 MS4A6EQ96DS6 147 aa23.03■■□□□ 1.28
SNF8-213ENST00000514929 ATOH8Q96SQ7 321 aa23.03■■□□□ 1.28
SNF8-213ENST00000514929 FMO2Q99518 471 aa23.03■■□□□ 1.28
SNF8-213ENST00000514929 BARD1Q99728 777 aaKnown RBP23.03■■□□□ 1.28
SNF8-213ENST00000514929 ACSS3Q9H6R3 686 aa23.03■■□□□ 1.28
SNF8-213ENST00000514929 PRM3Q9NNZ6 103 aa23.03■■□□□ 1.28
SNF8-213ENST00000514929 STMN3Q9NZ72 180 aa23.03■■□□□ 1.28
SNF8-213ENST00000514929 A0A088AWK7 358 aa23.02■■□□□ 1.28
SNF8-213ENST00000514929 TRAV17A0A0B4J275 112 aa23.02■■□□□ 1.28
SNF8-213ENST00000514929 CBX6O95503 412 aa23.02■■□□□ 1.28
SNF8-213ENST00000514929 ACSL3O95573 720 aa23.02■■□□□ 1.28
SNF8-213ENST00000514929 WDPCPO95876 746 aa23.02■■□□□ 1.28
SNF8-213ENST00000514929 ZNF10P21506 573 aaPredicted RBP23.02■■□□□ 1.28
SNF8-213ENST00000514929 IRF9Q00978 393 aa23.02■■□□□ 1.28
SNF8-213ENST00000514929 CHIT1Q13231 466 aa23.02■■□□□ 1.28
SNF8-213ENST00000514929 HIST2H2ACQ16777 129 aaPredicted RBP23.02■■□□□ 1.28
SNF8-213ENST00000514929 GLE1Q53GS7 698 aaKnown RBP23.02■■□□□ 1.28
SNF8-213ENST00000514929 HIST2H2AA3Q6FI13 130 aa23.02■■□□□ 1.28
SNF8-213ENST00000514929 RPUSD3Q6P087 351 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms