RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 OR13F1Q8NGS4 319 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 OR6Y1Q8NGX8 325 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 VANGL1Q8TAA9 524 aaPredicted RBP4.34□□□□□ -1.71
NIPBL-206ENST00000509429 SCAMP5Q8TAC9 235 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 DTX3LQ8TDB6 740 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 GLYATL2Q8WU03 294 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 SELENOMQ8WWX9 145 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 ELMO1Q92556 727 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 PHYHIPQ92561 330 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 HAVCR1Q96D42 359 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 REPS1Q96D71 796 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 MTBPQ96DY7 904 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 MCRS1Q96EZ8 462 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 PDXPQ96GD0 296 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 SLC41A3Q96GZ6 507 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 FBXL20Q96IG2 436 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 CCDC140Q96MF4 163 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 CASD1Q96PB1 797 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 ZIM3Q96PE6 472 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 PANX1Q96RD7 426 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 CHP1Q99653 195 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 VRK1Q99986 396 aaPredicted RBP4.34□□□□□ -1.71
NIPBL-206ENST00000509429 APOL2Q9BQE5 337 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 TUBGCP2Q9BSJ2 902 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 MRPL13Q9BYD1 178 aaKnown RBP4.34□□□□□ -1.71
NIPBL-206ENST00000509429 ZNF350Q9GZX5 532 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 RAB17Q9H0T7 212 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 P2RY12Q9H244 342 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 TAF1DQ9H5J8 278 aaPredicted RBP4.34□□□□□ -1.71
NIPBL-206ENST00000509429 MLXIPLQ9NP71 852 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 NECTIN3Q9NQS3 549 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 ZCCHC3Q9NUD5 404 aaKnown RBP4.34□□□□□ -1.71
NIPBL-206ENST00000509429 OXSMQ9NWU1 459 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 CTTNBP2NLQ9P2B4 639 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 KLHL8Q9P2G9 620 aaPredicted RBP4.34□□□□□ -1.71
NIPBL-206ENST00000509429 UTS2RQ9UKP6 389 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 SARDHQ9UL12 918 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 STARD10Q9Y365 291 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 TRAF6Q9Y4K3 522 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 USH1CQ9Y6N9 552 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 RFX7Q2KHR2 1363 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 NOS1P29475 1434 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 POGZQ7Z3K3 1410 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 MLH3Q9UHC1 1453 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 LRRC7Q96NW7 1537 aa4.34□□□□□ -1.71
NIPBL-206ENST00000509429 ITSN1Q15811 1721 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 NRKQ7Z2Y5 1582 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 ATP7BP35670 1465 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 PTCH1Q13635 1447 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 ADGRF5Q8IZF2 1346 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 ZNF541Q9H0D2 1346 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 TRAV25A0A0B4J276 109 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 TRBV2A0A0J9YWF9 115 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 A0A1W2PQ72 361 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 PQLC2LA1A4F0 135 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 PIPSLA2A3N6 862 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 ARHGAP42A6NI28 874 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 CLCA1A8K7I4 914 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 CCDC188H7C350 402 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 CTDSP2O14595 271 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 ADAMDEC1O15204 470 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 BUD23O43709 281 aaKnown RBP4.33□□□□□ -1.72
NIPBL-206ENST00000509429 GMDSO60547 372 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 CCNT2O60583 730 aaKnown RBP4.33□□□□□ -1.72
NIPBL-206ENST00000509429 EIF1BO60739 113 aaKnown RBP4.33□□□□□ -1.72
NIPBL-206ENST00000509429 HCN1O60741 890 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 TULP3O75386 442 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 LRCH4O75427 683 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 SLCO2B1O94956 709 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 SYF2O95926 243 aaKnown RBP4.33□□□□□ -1.72
NIPBL-206ENST00000509429 AHSGP02765 367 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 ANXA1P04083 346 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 GPIP06744 558 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 CRHP06850 196 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 GP1BAP07359 652 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 MMP3P08254 477 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 DGKAP23743 735 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 ACVR2AP27037 513 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 POU1F1P28069 291 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 TEAD1P28347 426 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 BDKRB2P30411 391 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 CHRNA5P30532 468 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 OR1E1P30953 314 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 PGM1P36871 562 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 EIF1P41567 113 aaKnown RBP4.33□□□□□ -1.72
NIPBL-206ENST00000509429 MAGEB1P43366 347 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 TGM4P49221 684 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 CARSP49589 748 aaKnown RBP4.33□□□□□ -1.72
NIPBL-206ENST00000509429 PKNOX1P55347 436 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 PSME3P61289 254 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 ATP6V0D1P61421 351 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 ARF6P62330 175 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 VSNL1P62760 191 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 BLOC1S1P78537 153 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 FLI1Q01543 452 aaPredicted RBP4.33□□□□□ -1.72
NIPBL-206ENST00000509429 SPP2Q13103 211 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 TP53BP2Q13625 1128 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 ATP1A4Q13733 1029 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 RCAN2Q14206 197 aa4.33□□□□□ -1.72
NIPBL-206ENST00000509429 ZNF273Q14593 569 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms